RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 RNASEH2CQ8TDP1 164 aaKnown RBP9.46□□□□□ -0.9
DNMT1-218ENST00000589294 VN1R17PQ8TDU5 208 aa9.46□□□□□ -0.9
DNMT1-218ENST00000589294 CXorf58Q96LI9 332 aa9.46□□□□□ -0.9
DNMT1-218ENST00000589294 PSENENQ9NZ42 101 aa9.46□□□□□ -0.9
DNMT1-218ENST00000589294 RCL1Q9Y2P8 373 aaKnown RBP9.46□□□□□ -0.9
DNMT1-218ENST00000589294 STRAPQ9Y3F4 350 aaKnown RBP9.46□□□□□ -0.9
DNMT1-218ENST00000589294 L7N2F9 121 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 OR2J3O76001 311 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 NDUFB8O95169 186 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 TMEM50AO95807 157 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 GIPP09681 153 aaPredicted RBP9.45□□□□□ -0.9
DNMT1-218ENST00000589294 PET100P0DJ07 73 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 PAX9P55771 341 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 RAP2BP61225 183 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 RPL23AP62750 156 aaKnown RBP9.45□□□□□ -0.9
DNMT1-218ENST00000589294 VAMP2P63027 116 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 RUNX1Q01196 453 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 FGL1Q08830 312 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 EXOSC2Q13868 293 aaKnown RBP9.45□□□□□ -0.9
DNMT1-218ENST00000589294 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 LCNL1Q6ZST4 164 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 PPP1R1CQ8WVI7 109 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 ATP6V0BQ99437 205 aa9.45□□□□□ -0.9
DNMT1-218ENST00000589294 LSM5Q9Y4Y9 91 aaKnown RBP9.45□□□□□ -0.9
DNMT1-218ENST00000589294 TRBV7-1A0A0A6YYK4 115 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 I3L2K1 104 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 DEDDO75618 318 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 MPC2O95563 127 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 IFNA4P05014 189 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 GPX4P36969 197 aaPredicted RBP9.44□□□□□ -0.9
DNMT1-218ENST00000589294 S100A10P60903 97 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 SPANXN5Q5MJ07 72 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 ZNF343Q6P1L6 599 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 CHAC2Q8WUX2 184 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 TMEM170AQ8WVE7 144 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 EEF1AKMT3Q96AZ1 226 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 MISP3Q96FF7 219 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 WDR89Q96FK6 387 aaPredicted RBP9.44□□□□□ -0.9
DNMT1-218ENST00000589294 C11orf1Q9H5F2 150 aa9.44□□□□□ -0.9
DNMT1-218ENST00000589294 RPS10-NUDT3A0A1W2PQS6 291 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 C15orf62A8K5M9 175 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 E5RGE8 158 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 K7EIM0 57 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 SCAF4O95104 1147 aaKnown RBP9.43□□□□□ -0.9
DNMT1-218ENST00000589294 MT-CO2P00403 227 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 OR8U8P0C7N1 319 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 ETFRF1Q6IPR1 90 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 C11orf87Q6NUJ2 197 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 PRSS54Q6PEW0 395 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 TMEM14EPQ6UXP3 125 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 ETV3LQ6ZN32 361 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 SCARB1Q8WTV0 552 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 C4orf3Q8WVX3 66 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 CACNG8Q8WXS5 425 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 TXN2Q99757 166 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 RNF126Q9BV68 326 aa9.43□□□□□ -0.9
DNMT1-218ENST00000589294 GAR1Q9NY12 217 aaKnown RBP9.43□□□□□ -0.9
DNMT1-218ENST00000589294 ANK2Q01484 3957 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.42□□□□□ -0.9
DNMT1-218ENST00000589294 ADARB2-AS1A8MUL3 147 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 NUDT19A8MXV4 375 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 H0YIZ8 118 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 I3L521 148 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 LGALS1P09382 135 aaKnown RBP9.42□□□□□ -0.9
DNMT1-218ENST00000589294 SLC25A4P12235 298 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 LYL1P12980 280 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 FCGR2BP31994 310 aaPredicted RBP9.42□□□□□ -0.9
DNMT1-218ENST00000589294 P2RY1P47900 373 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 MFAP4P55083 255 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 LRRC37A5PQ49AS3 106 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 KLHL30-AS1Q8NEE0 82 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 THAP6Q8TBB0 222 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 PINX1Q96BK5 328 aaKnown RBP9.42□□□□□ -0.9
DNMT1-218ENST00000589294 OR4C12Q96R67 309 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 GNB4Q9HAV0 340 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 LYRM2Q9NU23 88 aaPredicted RBP9.42□□□□□ -0.9
DNMT1-218ENST00000589294 C21orf62Q9NYP8 219 aa9.42□□□□□ -0.9
DNMT1-218ENST00000589294 PEF1Q9UBV8 284 aaKnown RBP9.42□□□□□ -0.9
DNMT1-218ENST00000589294 H3BP45 60 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 HSPB1P04792 205 aaKnown RBP9.41□□□□□ -0.9
DNMT1-218ENST00000589294 CLEC3BP05452 202 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 OPRK1P41145 380 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 NPBWR1P48145 328 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 BCAP31P51572 246 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 CAV2P51636 162 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 NSUN5P1Q3KNT7 163 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 ZNF502Q8TBZ5 544 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 SLC25A31Q9H0C2 315 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 FNDC4Q9H6D8 234 aaPredicted RBP9.41□□□□□ -0.9
DNMT1-218ENST00000589294 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
DNMT1-218ENST00000589294 OR5AC2Q9NZP5 309 aa9.41□□□□□ -0.9
DNMT1-218ENST00000589294 PAIP2BQ9ULR5 123 aaKnown RBP9.41□□□□□ -0.9
DNMT1-218ENST00000589294 A0A1W2PRX2 142 aa9.4□□□□□ -0.9
DNMT1-218ENST00000589294 MFSD2BA6NFX1 497 aa9.4□□□□□ -0.9
DNMT1-218ENST00000589294 PMS2P5A8MQ11 134 aa9.4□□□□□ -0.9
DNMT1-218ENST00000589294 DEFA5Q01523 94 aa9.4□□□□□ -0.9
DNMT1-218ENST00000589294 CD69Q07108 199 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms