RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 RNF167Q9H6Y7 350 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 APLNQ9ULZ1 77 aa10.22□□□□□ -0.77
VMP1-209ENST00000588915 IGKV3-7A0A075B6H7 116 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 LOC100506127A0A0U1RQW1 187 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 DNASE2O00115 360 aaPredicted RBP10.21□□□□□ -0.77
VMP1-209ENST00000588915 PMP2P02689 132 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 NPBWR1P48145 328 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 PRCDQ00LT1 54 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 UBE2NLQ5JXB2 153 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 TOMM20LQ6UXN7 152 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 H2BFWTQ7Z2G1 175 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 GBGT1Q8N5D6 347 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 MISP3Q96FF7 219 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 FXYD6Q9H0Q3 95 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 MS4A6AQ9H2W1 248 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 Q9H521 79 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 TMEM231Q9H6L2 316 aa10.21□□□□□ -0.77
VMP1-209ENST00000588915 IGHV3-49A0A0A0MS15 119 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 A0A1W2PS18 150 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 INS-IGF2F8WCM5 200 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 ST8SIA3O43173 380 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 PRSS3P35030 304 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 DEFB131AP59861 70 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 PRR20EP86478 221 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 PRR20CP86479 221 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 PRR20DP86480 221 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 PRR20BP86481 221 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 PRR20AP86496 221 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 ZNF600Q6ZNG1 722 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 ST8SIA2Q92186 375 aa10.2□□□□□ -0.78
VMP1-209ENST00000588915 IGHV3OR16-13A0A075B7E8 117 aa10.19□□□□□ -0.78
VMP1-209ENST00000588915 IGHV3-74A0A0B4J1X5 117 aa10.19□□□□□ -0.78
VMP1-209ENST00000588915 UCP3P55916 312 aa10.19□□□□□ -0.78
VMP1-209ENST00000588915 TMEM69Q5SWH9 247 aa10.19□□□□□ -0.78
VMP1-209ENST00000588915 MORN3Q6PF18 240 aaPredicted RBP10.19□□□□□ -0.78
VMP1-209ENST00000588915 LYSMD2Q8IV50 215 aa10.19□□□□□ -0.78
VMP1-209ENST00000588915 STHQ8IWL8 128 aa10.19□□□□□ -0.78
VMP1-209ENST00000588915 Q8NAQ8 132 aa10.19□□□□□ -0.78
VMP1-209ENST00000588915 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
VMP1-209ENST00000588915 IGLL5B9A064 214 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 TMEM50AO95807 157 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 MIFP14174 115 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 HRH1P35367 487 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 TAS2R20P59543 309 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 TSPAN5P62079 268 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 PHLDA2Q53GA4 152 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 PVRIGQ6DKI7 326 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 LINC00336Q6ZUF6 198 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 TBC1D26Q86UD7 250 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 CENPSQ8N2Z9 138 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 LILRB2Q8N423 598 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 PINX1Q96BK5 328 aaKnown RBP10.18□□□□□ -0.78
VMP1-209ENST00000588915 ZFAND3Q9H8U3 227 aa10.18□□□□□ -0.78
VMP1-209ENST00000588915 PUS1Q9Y606 427 aaKnown RBP eCLIP10.18□□□□□ -0.78
VMP1-209ENST00000588915 ZNF705EA8MWA4 302 aaPredicted RBP10.17□□□□□ -0.78
VMP1-209ENST00000588915 CORTO00230 105 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 DEFB4AO15263 64 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 IGKV1-39P01597 117 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 APOHP02749 345 aaPredicted RBP10.17□□□□□ -0.78
VMP1-209ENST00000588915 IGKV1D-39P04432 117 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 SPP1P10451 314 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 NPPCP23582 126 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 SNCAP37840 140 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 RPL11P62913 178 aaKnown RBP10.17□□□□□ -0.78
VMP1-209ENST00000588915 TRPT1Q86TN4 253 aaKnown RBP10.17□□□□□ -0.78
VMP1-209ENST00000588915 SAMD12Q8N8I0 201 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 GPX8Q8TED1 209 aa10.17□□□□□ -0.78
VMP1-209ENST00000588915 TRAV10A0A0B4J240 114 aa10.16□□□□□ -0.78
VMP1-209ENST00000588915 IGHV3-48P01763 117 aa10.16□□□□□ -0.78
VMP1-209ENST00000588915 GIG44P09565 113 aaPredicted RBP10.16□□□□□ -0.78
VMP1-209ENST00000588915 HLA-DMAP28067 261 aa10.16□□□□□ -0.78
VMP1-209ENST00000588915 SUB1P53999 127 aaKnown RBP eCLIP10.16□□□□□ -0.78
VMP1-209ENST00000588915 KCTD21Q4G0X4 260 aa10.16□□□□□ -0.78
VMP1-209ENST00000588915 LEMD1Q68G75 181 aa10.16□□□□□ -0.78
VMP1-209ENST00000588915 MRGPRFQ96AM1 343 aa10.16□□□□□ -0.78
VMP1-209ENST00000588915 SCPEP1Q9HB40 452 aa10.16□□□□□ -0.78
VMP1-209ENST00000588915 IGHV4-28A0A0C4DH34 117 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 K7EQG2 157 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 SCGB2A1O75556 95 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 ATG12O94817 140 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 RBMY1A1P0DJD3 496 aaKnown RBP10.15□□□□□ -0.78
VMP1-209ENST00000588915 RBMY1CP0DJD4 496 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 CRYBB3P26998 211 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 HLA-DMBP28068 263 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 RPS19P39019 145 aaKnown RBP10.15□□□□□ -0.78
VMP1-209ENST00000588915 RBMY1FQ15415 496 aaKnown RBP10.15□□□□□ -0.78
VMP1-209ENST00000588915 FAM24BQ8N5W8 94 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 ZNF486Q96H40 463 aaPredicted RBP10.15□□□□□ -0.78
VMP1-209ENST00000588915 METTL26Q96S19 204 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 RNF126Q9BV68 326 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 RABAC1Q9UI14 185 aa10.15□□□□□ -0.78
VMP1-209ENST00000588915 A0A1B0GU03 582 aa10.14□□□□□ -0.79
VMP1-209ENST00000588915 SMIM31A0A1B0GVY4 71 aa10.14□□□□□ -0.79
VMP1-209ENST00000588915 CLN5O75503 358 aa10.14□□□□□ -0.79
VMP1-209ENST00000588915 RPL5P46777 297 aaKnown RBP10.14□□□□□ -0.79
VMP1-209ENST00000588915 RND3P61587 244 aa10.14□□□□□ -0.79
VMP1-209ENST00000588915 NEDD8Q15843 81 aa10.14□□□□□ -0.79
VMP1-209ENST00000588915 NARS2Q96I59 477 aaKnown RBP10.14□□□□□ -0.79
VMP1-209ENST00000588915 DNAH17Q9UFH2 4485 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 TRAV30A0A087WSZ9 112 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms