RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 UQCC1Q9NVA1 299 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 THYN1Q9P016 225 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 CDC42EP3Q9UKI2 254 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 TEX15Q9BXT5 2789 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 NAV3Q8IVL0 2385 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 RPS10-NUDT3A0A1W2PQS6 291 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 SOX15O60248 233 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 MPDU1O75352 247 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 CRYGCP07315 174 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 RAB14P61106 215 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 EXOSC2Q13868 293 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 VWC2Q2TAL6 325 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 AKIRIN2Q53H80 203 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 RPL7L1Q6DKI1 246 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 TMEM219Q86XT9 240 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 C22orf15Q8WYQ4 148 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 P2RX4Q99571 388 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 TMUB1Q9BVT8 246 aa8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 F11RQ9Y624 299 aaKnown RBP8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 SOX21Q9Y651 276 aaPredicted RBP8.38□□□□□ -1.07
NEDD4L-224ENST00000588712 A0A1B0GW64 132 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 NDUFS6O75380 124 aaKnown RBP8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 HIST1H1BP16401 226 aaKnown RBP8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 SSBP2P81877 361 aaPredicted RBP8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 RAB31Q13636 194 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 CLLU1Q5K131 121 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 PVRIGQ6DKI7 326 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 CLEC9AQ6UXN8 241 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 GINS3Q9BRX5 216 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 ARV1Q9H2C2 271 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 NPVFQ9HCQ7 196 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 UBQLN2Q9UHD9 624 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 VPS13CQ709C8 3753 aa8.37□□□□□ -1.07
NEDD4L-224ENST00000588712 MDFIC2A0A1B0GVS7 189 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 IGHV4-59P01825 116 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 SEC11BP0C7V7 166 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 CRIP2P52943 208 aaPredicted RBP8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 FBLN7Q53RD9 439 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 SCARB1Q8WTV0 552 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 ZNF580Q9UK33 172 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 PRSS46E5RG02 174 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 C17orf112F2Z3M2 114 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 IGHG2P01859 326 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 IGF1P05019 195 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 H2AFB1P0C5Y9 115 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 AREGP15514 252 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 CD69Q07108 199 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 ARL16Q0P5N6 197 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 SLC35E3Q7Z769 313 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 HAPLN4Q86UW8 402 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 BSCL2Q96G97 398 aaPredicted RBP8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 NPFFR1Q9GZQ6 430 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 WNT10AQ9GZT5 417 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 WFDC1Q9HC57 220 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 PARP11Q9NR21 331 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 KCNIP2Q9NS61 270 aa8.36□□□□□ -1.07
NEDD4L-224ENST00000588712 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 AP4M1O00189 453 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 HOXA3O43365 443 aaPredicted RBP8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 FBXO24O75426 580 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 LY6G6DO95868 133 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 AMY1AP04745 511 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 SRD5A1P18405 259 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 UNQ5815/PRO19632Q6UWF5 114 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 SIGLECL1Q8N7X8 197 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 ZNF709Q8N972 641 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 CLRN3Q8NCR9 226 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 LFNGQ8NES3 379 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 TMEM170AQ8WVE7 144 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 SLC35E1Q96K37 410 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 ZNF48Q96MX3 618 aaPredicted RBP8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 PSMG3Q9BT73 122 aaPredicted RBP8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 PRSS22Q9GZN4 317 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 TIMM9Q9Y5J7 89 aa8.35□□□□□ -1.07
NEDD4L-224ENST00000588712 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 CLDN34H7C241 214 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 SPP1P10451 314 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 OPRK1P41145 380 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 RAB5CP51148 216 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 RPL15P61313 204 aaKnown RBP8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 SERF2P84101 59 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 TEPPQ6URK8 271 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 FAM110DQ8TAY7 271 aaPredicted RBP8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 ZNF418Q8TF45 676 aaPredicted RBP8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 RNF141Q8WVD5 230 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 JMJD8Q96S16 334 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 HSPB9Q9BQS6 159 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 FAM103A1Q9BTL3 118 aaKnown RBP8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 WDR83OSQ9Y284 106 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 FBXO7Q9Y3I1 522 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 FLNBO75369 2602 aaKnown RBP8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 TRAV41A0A0B4J266 112 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 UMAD1C9J7I0 102 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 ATP6V0E1O15342 81 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 SCGB2A1O75556 95 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 BRI3O95415 125 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 REG1AP05451 166 aa8.34□□□□□ -1.07
NEDD4L-224ENST00000588712 FABP1P07148 127 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms