RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 CST7O76096 145 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 OPN1MWP04001 364 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 OPN1MW2P0DN77 364 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 OPN1MW3P0DN78 364 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 GNB1P62873 340 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 FXYD3Q14802 87 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 MRGPRG-AS1Q2M3A8 158 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 TEX38Q6PEX7 206 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 NDUFA11Q86Y39 141 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 HEYLQ9NQ87 328 aaPredicted RBP15.78■□□□□ 0.12
ATG4D-208ENST00000588667 PAIP2BQ9ULR5 123 aaKnown RBP15.78■□□□□ 0.12
ATG4D-208ENST00000588667 BORCS7-ASMTA0A0B4J1R7 106 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 G3V318 75 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 SCAF4O95104 1147 aaKnown RBP15.77■□□□□ 0.12
ATG4D-208ENST00000588667 CNIH1O95406 144 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 IGHG4P01861 327 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 EGR2P11161 476 aaPredicted RBP15.77■□□□□ 0.12
ATG4D-208ENST00000588667 PRCDQ00LT1 54 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 TMEM267Q0VDI3 215 aaPredicted RBP15.77■□□□□ 0.12
ATG4D-208ENST00000588667 EXOSC2Q13868 293 aaKnown RBP15.77■□□□□ 0.12
ATG4D-208ENST00000588667 ECSCRQ19T08 205 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 TMEM14EPQ6UXP3 125 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 MMD2Q8IY49 270 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 OR1L8Q8NGR8 309 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 ZNF430Q9H8G1 570 aaPredicted RBP15.77■□□□□ 0.12
ATG4D-208ENST00000588667 PLEKHA3Q9HB20 300 aa15.77■□□□□ 0.12
ATG4D-208ENST00000588667 VWFP04275 2813 aa15.77■□□□□ 0.11
ATG4D-208ENST00000588667 TEX50A0A1B0GTY4 177 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 TCRBV4S1A1TA0A5B7 111 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 CFDP00746 253 aaPredicted RBP15.76■□□□□ 0.11
ATG4D-208ENST00000588667 PPIFP30405 207 aaKnown RBP15.76■□□□□ 0.11
ATG4D-208ENST00000588667 HBG1P69891 147 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 HBG2P69892 147 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 FOXE3Q13461 319 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 C19orf54Q5BKX5 351 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 TMEM217Q8N7C4 229 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 OR1S2Q8NGQ3 325 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 OR5C1Q8NGR4 320 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 PHYHIPLQ96FC7 376 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 BSCL2Q96G97 398 aaPredicted RBP15.76■□□□□ 0.11
ATG4D-208ENST00000588667 FAM103A1Q9BTL3 118 aaKnown RBP15.76■□□□□ 0.11
ATG4D-208ENST00000588667 HINT2Q9BX68 163 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 UBQLN2Q9UHD9 624 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 TSSC4Q9Y5U2 329 aaPredicted RBP15.76■□□□□ 0.11
ATG4D-208ENST00000588667 MGAM2Q2M2H8 2515 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 ELANEP08246 267 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 METTL15P1P0C7V9 234 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 MAS1LP35410 378 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 ZNF266Q14584 549 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 TNXAQ16473 311 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 AKIRIN2Q53H80 203 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 RPL7L1Q6DKI1 246 aaKnown RBP15.76■□□□□ 0.11
ATG4D-208ENST00000588667 BAP18Q8IXM2 172 aa15.76■□□□□ 0.11
ATG4D-208ENST00000588667 ACTL6BO94805 426 aa15.75■□□□□ 0.11
ATG4D-208ENST00000588667 IFNA10P01566 189 aa15.75■□□□□ 0.11
ATG4D-208ENST00000588667 MYOD1P15172 320 aa15.75■□□□□ 0.11
ATG4D-208ENST00000588667 KHDC1LQ5JSQ8 128 aa15.75■□□□□ 0.11
ATG4D-208ENST00000588667 PRR31Q5SQ13 230 aa15.75■□□□□ 0.11
ATG4D-208ENST00000588667 RNF152Q8N8N0 203 aa15.75■□□□□ 0.11
ATG4D-208ENST00000588667 UBAC2Q8NBM4 344 aa15.75■□□□□ 0.11
ATG4D-208ENST00000588667 OR4C12Q96R67 309 aa15.75■□□□□ 0.11
ATG4D-208ENST00000588667 PKD1L1Q8TDX9 2849 aa15.74■□□□□ 0.11
ATG4D-208ENST00000588667 ADARB2-AS1A8MUL3 147 aa15.74■□□□□ 0.11
ATG4D-208ENST00000588667 DFFBO76075 338 aa15.74■□□□□ 0.11
ATG4D-208ENST00000588667 CLINT1Q14677 625 aa15.74■□□□□ 0.11
ATG4D-208ENST00000588667 UNQ5815/PRO19632Q6UWF5 114 aa15.74■□□□□ 0.11
ATG4D-208ENST00000588667 LFNGQ8NES3 379 aa15.74■□□□□ 0.11
ATG4D-208ENST00000588667 NDUFA4L2Q9NRX3 87 aa15.74■□□□□ 0.11
ATG4D-208ENST00000588667 A0A1W2PN81 502 aa15.73■□□□□ 0.11
ATG4D-208ENST00000588667 PSMB8P28062 276 aa15.73■□□□□ 0.11
ATG4D-208ENST00000588667 CHRNA7P36544 502 aa15.73■□□□□ 0.11
ATG4D-208ENST00000588667 NSUN5P1Q3KNT7 163 aa15.73■□□□□ 0.11
ATG4D-208ENST00000588667 EIF5AL1Q6IS14 154 aaKnown RBP15.73■□□□□ 0.11
ATG4D-208ENST00000588667 ALKAL2Q6UX46 152 aa15.73■□□□□ 0.11
ATG4D-208ENST00000588667 SCARB1Q8WTV0 552 aa15.73■□□□□ 0.11
ATG4D-208ENST00000588667 SRSF12Q8WXF0 261 aaKnown RBP15.73■□□□□ 0.11
ATG4D-208ENST00000588667 ATP5SQ99766 215 aa15.73■□□□□ 0.11
ATG4D-208ENST00000588667 WFDC1Q9HC57 220 aa15.73■□□□□ 0.11
ATG4D-208ENST00000588667 IGLV1-40P01703 118 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 ATP5IP56385 69 aaPredicted RBP15.72■□□□□ 0.11
ATG4D-208ENST00000588667 MRPL41Q8IXM3 137 aaKnown RBP15.72■□□□□ 0.11
ATG4D-208ENST00000588667 OR10P1Q8NGE3 313 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 PINX1Q96BK5 328 aaKnown RBP15.72■□□□□ 0.11
ATG4D-208ENST00000588667 TMEM68Q96MH6 324 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 A0A1W2PRX2 142 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 C15orf62A8K5M9 175 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 INS-IGF2F8WCM5 200 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 TSPAN15O95858 294 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 OR8U8P0C7N1 319 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 RAB11AP62491 216 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 OR8G2PQ6IF36 304 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 LILRB2Q8N423 598 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 SLC24A4Q8NFF2 622 aa15.72■□□□□ 0.11
ATG4D-208ENST00000588667 SOX15O60248 233 aa15.71■□□□□ 0.11
ATG4D-208ENST00000588667 RPLP1P05386 114 aaKnown RBP15.71■□□□□ 0.11
ATG4D-208ENST00000588667 HTR2BP41595 481 aa15.71■□□□□ 0.11
ATG4D-208ENST00000588667 ERHP84090 104 aaKnown RBP15.71■□□□□ 0.11
ATG4D-208ENST00000588667 SLC38A11Q08AI6 406 aa15.71■□□□□ 0.11
ATG4D-208ENST00000588667 ATP6V1FQ16864 119 aa15.71■□□□□ 0.11
ATG4D-208ENST00000588667 C10orf55Q5SWW7 151 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms