RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 C16orf95Q9H693 158 aa17.73■□□□□ 0.43
ACTN4-210ENST00000588618 SERTAD4Q9NUC0 356 aa17.73■□□□□ 0.43
ACTN4-210ENST00000588618 CST7O76096 145 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 PRH1P02810 166 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 HIST1H1BP16401 226 aaKnown RBP17.72■□□□□ 0.43
ACTN4-210ENST00000588618 CXCL2P19875 107 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 SULT1A1P50225 295 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 AP2S1P53680 142 aaPredicted RBP17.72■□□□□ 0.43
ACTN4-210ENST00000588618 BAXQ07812 192 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 ZNF329Q86UD4 541 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 OR10P1Q8NGE3 313 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 MFFQ9GZY8 342 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 PMS2P5A8MQ11 134 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 PPIFP30405 207 aaKnown RBP17.72■□□□□ 0.43
ACTN4-210ENST00000588618 HBG1P69891 147 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 HBG2P69892 147 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 EWSR1Q01844 656 aaKnown RBP eCLIP17.72■□□□□ 0.432e-6■■■■□ 22.2
ACTN4-210ENST00000588618 ARL16Q0P5N6 197 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 TMEM217Q8N7C4 229 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 RNASEH2CQ8TDP1 164 aaKnown RBP17.72■□□□□ 0.43
ACTN4-210ENST00000588618 AQP10Q96PS8 301 aa17.72■□□□□ 0.43
ACTN4-210ENST00000588618 H3BUA1 57 aa17.71■□□□□ 0.43
ACTN4-210ENST00000588618 SOX15O60248 233 aa17.71■□□□□ 0.43
ACTN4-210ENST00000588618 HNRNPCP07910 306 aaKnown RBP eCLIP17.71■□□□□ 0.434e-6■□□□□ 10.4
ACTN4-210ENST00000588618 OPRK1P41145 380 aa17.71■□□□□ 0.43
ACTN4-210ENST00000588618 EIF2B2P49770 351 aaKnown RBP17.71■□□□□ 0.43
ACTN4-210ENST00000588618 NHLH2Q02577 135 aa17.71■□□□□ 0.43
ACTN4-210ENST00000588618 LAMTOR1Q6IAA8 161 aa17.71■□□□□ 0.43
ACTN4-210ENST00000588618 ACOT7LQ6ZUV0 252 aa17.71■□□□□ 0.43
ACTN4-210ENST00000588618 MS4A10Q96PG2 267 aa17.71■□□□□ 0.43
ACTN4-210ENST00000588618 PF4V1P10720 104 aa17.7■□□□□ 0.42
ACTN4-210ENST00000588618 EXOSC2Q13868 293 aaKnown RBP17.7■□□□□ 0.42
ACTN4-210ENST00000588618 TEX38Q6PEX7 206 aa17.7■□□□□ 0.42
ACTN4-210ENST00000588618 LINC01006Q8NI28 216 aa17.7■□□□□ 0.42
ACTN4-210ENST00000588618 CFHR3Q02985 330 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 LGALSLQ3ZCW2 172 aaPredicted RBP17.69■□□□□ 0.42
ACTN4-210ENST00000588618 PVRIGQ6DKI7 326 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 LILRB2Q8N423 598 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 C9orf62Q8N4C0 152 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 SLA2Q9H6Q3 261 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 IGLV11-55A0A075B6I3 123 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 RPS10-NUDT3A0A1W2PQS6 291 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 PRSS46E5RG02 174 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 OR2J3O76001 311 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 TRGV3P03979 118 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 ETFRF1Q6IPR1 90 aa17.69■□□□□ 0.42
ACTN4-210ENST00000588618 IGHG4P01861 327 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 S100A11P31949 105 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 TPPP2P59282 170 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 RHOGP84095 191 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 OR2F1Q13607 317 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 OR1S2Q8NGQ3 325 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 PPP1R14BQ96C90 147 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 FANCD2OSQ96PS1 177 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 FBXL7Q9UJT9 491 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 RNF114Q9Y508 228 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 HSPB11Q9Y547 144 aa17.68■□□□□ 0.42
ACTN4-210ENST00000588618 IGLV1-40P01703 118 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 ZNF345Q14585 488 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 COMMD1Q8N668 190 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 KLHDC1Q8N7A1 406 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 NECAP1Q8NC96 275 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 OR5C1Q8NGR4 320 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 CLPSL1A2RUU4 121 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 HAX1O00165 279 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 MT-CO2P00403 227 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 SLC38A11Q08AI6 406 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 C10orf99Q6UWK7 81 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 OR4X2Q8NGF9 303 aa17.67■□□□□ 0.42
ACTN4-210ENST00000588618 A0A0D9SG52 128 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 A0A1B0GUS0 222 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 TMEM89A2RUT3 159 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 BRI3O95415 125 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 ELANEP08246 267 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 CD69Q07108 199 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 MLANAQ16655 118 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 OR5AU1Q8NGC0 362 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 BOLA1Q9Y3E2 137 aa17.66■□□□□ 0.42
ACTN4-210ENST00000588618 TRBV9A0A0B4J1U6 114 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 IGHV3-21A0A0B4J1V1 117 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 SMCO3A2RU48 225 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 FAM223BA6NKX1 122 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 MDKP21741 143 aaPredicted RBP17.65■□□□□ 0.42
ACTN4-210ENST00000588618 PSMB8P28062 276 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 GPX4P36969 197 aaPredicted RBP17.65■□□□□ 0.42
ACTN4-210ENST00000588618 RAB9AP51151 201 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 DEFA5Q01523 94 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 FOXE3Q13461 319 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 CLINT1Q14677 625 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 C15orf32Q32M92 178 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 FAM223AQ8IWN6 122 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 KCNRGQ8N5I3 272 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.65■□□□□ 0.42
ACTN4-210ENST00000588618 CACNG8Q8WXS5 425 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 SLC35E1Q96K37 410 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 SMIM3Q9BZL3 60 aa17.65■□□□□ 0.42
ACTN4-210ENST00000588618 FNDC4Q9H6D8 234 aaPredicted RBP17.65■□□□□ 0.42
ACTN4-210ENST00000588618 FOXL1Q12952 345 aa17.64■□□□□ 0.41
ACTN4-210ENST00000588618 SLC16A13Q7RTY0 426 aa17.64■□□□□ 0.41
ACTN4-210ENST00000588618 CXorf58Q96LI9 332 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms