RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TREML4Q6UXN2 200 aa20.55■□□□□ 0.88
SCAMP4-210ENST00000588555 Q6YL49 198 aa20.55■□□□□ 0.88
SCAMP4-210ENST00000588555 IL17RELQ6ZVW7 336 aa20.55■□□□□ 0.88
SCAMP4-210ENST00000588555 RSG1Q9BU20 258 aa20.55■□□□□ 0.88
SCAMP4-210ENST00000588555 ANK3Q12955 4377 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-210ENST00000588555 CRYGCP07315 174 aa20.54■□□□□ 0.88
SCAMP4-210ENST00000588555 SULT1A2P50226 295 aa20.54■□□□□ 0.88
SCAMP4-210ENST00000588555 C16orf82Q7Z2V1 217 aa20.54■□□□□ 0.88
SCAMP4-210ENST00000588555 FNDC4Q9H6D8 234 aaPredicted RBP20.54■□□□□ 0.88
SCAMP4-210ENST00000588555 NPIPB5A8MRT5 1133 aa20.53■□□□□ 0.88
SCAMP4-210ENST00000588555 FGF7P21781 194 aa20.53■□□□□ 0.88
SCAMP4-210ENST00000588555 GPX4P36969 197 aaPredicted RBP20.53■□□□□ 0.88
SCAMP4-210ENST00000588555 MLANAQ16655 118 aa20.53■□□□□ 0.88
SCAMP4-210ENST00000588555 CACNG8Q8WXS5 425 aa20.53■□□□□ 0.88
SCAMP4-210ENST00000588555 WNT10AQ9GZT5 417 aa20.53■□□□□ 0.88
SCAMP4-210ENST00000588555 SMCO3A2RU48 225 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 LINC01548A6NM66 108 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 M0QZK8 103 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 RAB14P61106 215 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 BTNL8Q6UX41 500 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 SPNS3Q6ZMD2 512 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 CENPVQ7Z7K6 275 aaPredicted RBP20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 LFNGQ8NES3 379 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 OR2G3Q8NGZ4 309 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 OR5R1Q8NH85 324 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 SGMS2Q8NHU3 365 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 RNF141Q8WVD5 230 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 PSMG3Q9BT73 122 aaPredicted RBP20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 NPVFQ9HCQ7 196 aa20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 LSM4Q9Y4Z0 139 aaKnown RBP20.52■□□□□ 0.88
SCAMP4-210ENST00000588555 ATP6V0E1O15342 81 aa20.51■□□□□ 0.87
SCAMP4-210ENST00000588555 GAMTQ14353 236 aa20.51■□□□□ 0.87
SCAMP4-210ENST00000588555 TTC9CQ8N5M4 171 aa20.51■□□□□ 0.87
SCAMP4-210ENST00000588555 PARP11Q9NR21 331 aa20.51■□□□□ 0.87
SCAMP4-210ENST00000588555 YAE1D1Q9NRH1 226 aa20.51■□□□□ 0.87
SCAMP4-210ENST00000588555 SLC16A13Q7RTY0 426 aa20.51■□□□□ 0.87
SCAMP4-210ENST00000588555 NPCDR1Q9BY65 106 aa20.51■□□□□ 0.87
SCAMP4-210ENST00000588555 OPRK1P41145 380 aa20.5■□□□□ 0.87
SCAMP4-210ENST00000588555 TMEM182Q6ZP80 229 aaPredicted RBP20.5■□□□□ 0.87
SCAMP4-210ENST00000588555 TIMM9Q9Y5J7 89 aa20.5■□□□□ 0.87
SCAMP4-210ENST00000588555 BAHCC1Q9P281 2608 aa20.49■□□□□ 0.87
SCAMP4-210ENST00000588555 MISP3Q96FF7 219 aa20.49■□□□□ 0.87
SCAMP4-210ENST00000588555 CORTO00230 105 aa20.49■□□□□ 0.87
SCAMP4-210ENST00000588555 MPDU1O75352 247 aa20.49■□□□□ 0.87
SCAMP4-210ENST00000588555 AKR1C1Q04828 323 aa20.48■□□□□ 0.87
SCAMP4-210ENST00000588555 TMEM144Q7Z5S9 345 aa20.48■□□□□ 0.87
SCAMP4-210ENST00000588555 OR1L6Q8NGR2 347 aa20.48■□□□□ 0.87
SCAMP4-210ENST00000588555 OR2T6Q8NHC8 308 aa20.48■□□□□ 0.87
SCAMP4-210ENST00000588555 LRRC20Q8TCA0 184 aa20.48■□□□□ 0.87
SCAMP4-210ENST00000588555 MGST2Q99735 147 aa20.48■□□□□ 0.87
SCAMP4-210ENST00000588555 VPREB3Q9UKI3 123 aa20.48■□□□□ 0.87
SCAMP4-210ENST00000588555 IGKV1OR2-108A0A075B7D4 117 aa20.47■□□□□ 0.87
SCAMP4-210ENST00000588555 DEFA4P12838 97 aa20.47■□□□□ 0.87
SCAMP4-210ENST00000588555 CRIP2P52943 208 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-210ENST00000588555 BLCAPP62952 87 aa20.47■□□□□ 0.87
SCAMP4-210ENST00000588555 TEPPQ6URK8 271 aa20.47■□□□□ 0.87
SCAMP4-210ENST00000588555 MRPL36Q9P0J6 103 aaKnown RBP20.47■□□□□ 0.87
SCAMP4-210ENST00000588555 UMAD1C9J7I0 102 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 HOXA3O43365 443 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 IGHG2P01859 326 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 RAB5CP51148 216 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 SERF2P84101 59 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 CXorf58Q96LI9 332 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 FANCD2OSQ96PS1 177 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 SMR3AQ99954 134 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 BTBD17A6NE02 478 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 ZNF705EA8MWA4 302 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 I3L2K1 104 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 PRH1P02810 166 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 SRP14P37108 136 aaKnown RBP20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 FHITP49789 147 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 AKIRIN2Q53H80 203 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 SLC35E1Q96K37 410 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 GGTLC1Q9BX51 225 aa20.46■□□□□ 0.87
SCAMP4-210ENST00000588555 IGLV11-55A0A075B6I3 123 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 MT-CO2P00403 227 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 IGHV3-48P01763 117 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 NDUFA5Q16718 116 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 ECSCRQ19T08 205 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 C19orf54Q5BKX5 351 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 ETFRF1Q6IPR1 90 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 UNQ5815/PRO19632Q6UWF5 114 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 SLC7A5P1Q8MH63 180 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 SIGLECL1Q8N7X8 197 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 OR5T1Q8NG75 326 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 FAM110DQ8TAY7 271 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 SAT2Q96F10 170 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 TMEM68Q96MH6 324 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 TMUB1Q9BVT8 246 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 TMEM160Q9NX00 188 aa20.45■□□□□ 0.86
SCAMP4-210ENST00000588555 LINC00862A6NCI5 91 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 TRIM77I1YAP6 450 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 Q6ZS46 218 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 ACY3Q96HD9 319 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 TNFRSF19Q9NS68 423 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 C17orf112F2Z3M2 114 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 G3V318 75 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 K7EIM0 57 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 IGF1P05019 195 aa20.44■□□□□ 0.86
SCAMP4-210ENST00000588555 CAMLGP49069 296 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms