RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 OR2T8A6NH00 312 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 CTSGP08311 255 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 EDN2P20800 178 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 ADMP35318 185 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 FAUP35544 74 aaKnown RBP7.91□□□□□ -1.14
TPM4-209ENST00000588483 TMEM187Q14656 261 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 Q6ZRM9 215 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 GTSCR1Q86UQ5 136 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 SBSPONQ8IVN8 264 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 SELENOHQ8IZQ5 122 aaKnown RBP7.91□□□□□ -1.14
TPM4-209ENST00000588483 DYNLRB2Q8TF09 96 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 WWC2-AS2Q96NR7 200 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 CHRDL1Q9BU40 450 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 MRPL27Q9P0M9 148 aaKnown RBP7.91□□□□□ -1.14
TPM4-209ENST00000588483 CACFD1Q9UGQ2 172 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 MLXQ9UH92 298 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 U3KQK5 164 aa7.91□□□□□ -1.14
TPM4-209ENST00000588483 TRAV25A0A0B4J276 109 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 ZNF320A2RRD8 509 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 K7EMT4 169 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 CORTO00230 105 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 RNASE2P10153 161 aaKnown RBP7.9□□□□□ -1.14
TPM4-209ENST00000588483 SPCS3P61009 180 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 SUPT4H1P63272 117 aaKnown RBP7.9□□□□□ -1.14
TPM4-209ENST00000588483 PYDC2Q56P42 97 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 ZNF57Q68EA5 555 aaPredicted RBP7.9□□□□□ -1.14
TPM4-209ENST00000588483 TOMM5Q8N4H5 51 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 SLC35G3Q8N808 338 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 UXS1Q8NBZ7 420 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 CACNG8Q8WXS5 425 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 OR10C1Q96KK4 312 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 TM2D3Q9BRN9 247 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 PDCD10Q9BUL8 212 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 SRRQ9GZT4 340 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 DAZ1Q9NQZ3 744 aaKnown RBP7.9□□□□□ -1.14
TPM4-209ENST00000588483 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.9□□□□□ -1.14
TPM4-209ENST00000588483 MCUBQ9NWR8 336 aa7.9□□□□□ -1.14
TPM4-209ENST00000588483 CSMD3Q7Z407 3707 aa7.9□□□□□ -1.15
TPM4-209ENST00000588483 A0A0B4J2A0 478 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 PIGBOS1A0A0B4J2F0 54 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 C15orf62A8K5M9 175 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 MT-CO2P00403 227 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 IFNA17P01571 189 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 SUB1P53999 127 aaKnown RBP eCLIP7.89□□□□□ -1.15
TPM4-209ENST00000588483 MFAP4P55083 255 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 RELQ04864 619 aaPredicted RBP7.89□□□□□ -1.15
TPM4-209ENST00000588483 TM4SF20Q53R12 229 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 NMSQ5H8A3 153 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 SPANXN2Q5MJ10 180 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 TMEM268Q5VZI3 342 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 LINC00322Q6ZN03 302 aaPredicted RBP7.89□□□□□ -1.15
TPM4-209ENST00000588483 TMEM61Q8N0U2 210 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 GPR146Q96CH1 333 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 MISP3Q96FF7 219 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 ASCL2Q99929 193 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 SLC25A21Q9BQT8 299 aaPredicted RBP7.89□□□□□ -1.15
TPM4-209ENST00000588483 NDUFA13Q9P0J0 144 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 SHPKQ9UHJ6 478 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 KCNIP3Q9Y2W7 256 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 NBEAL2Q6ZNJ1 2754 aa7.89□□□□□ -1.15
TPM4-209ENST00000588483 IGHV3-21A0A0B4J1V1 117 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 IGHV3-35A0A0C4DH35 117 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 DUXBA0A1W2PPF3 345 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 NUPL2O15504 423 aaKnown RBP7.88□□□□□ -1.15
TPM4-209ENST00000588483 ANXA3P12429 323 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 SNCAP37840 140 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 CD81P60033 236 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 SRPXP78539 464 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 Q56UQ5 140 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 TMEM128Q5BJH2 165 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 SPINK9Q5DT21 86 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 BTNL8Q6UX41 500 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 LRTM2Q8N967 370 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 RNASE11Q8TAA1 199 aaKnown RBP7.88□□□□□ -1.15
TPM4-209ENST00000588483 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
TPM4-209ENST00000588483 NEURL2Q9BR09 285 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 CACNG5Q9UF02 275 aa7.88□□□□□ -1.15
TPM4-209ENST00000588483 TSPAN4O14817 238 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 CD7P09564 240 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 HTR2BP41595 481 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 NPBWR1P48145 328 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 HOXA1P49639 335 aaPredicted RBP7.87□□□□□ -1.15
TPM4-209ENST00000588483 C2orf83Q53S99 150 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 UBAC2Q8NBM4 344 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 RCHY1Q96PM5 261 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 SPAG8Q99932 426 aaPredicted RBP7.87□□□□□ -1.15
TPM4-209ENST00000588483 FNDC4Q9H6D8 234 aaPredicted RBP7.87□□□□□ -1.15
TPM4-209ENST00000588483 ZMAT4Q9H898 229 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 ENY2Q9NPA8 101 aa7.87□□□□□ -1.15
TPM4-209ENST00000588483 NAP1L6A6NFF2 107 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 GNG7O60262 68 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 SULT1A3P0DMM9 295 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 SULT1A4P0DMN0 295 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 AKR1C4P17516 323 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 CCR6P51684 374 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 UBE2MP61081 183 aaKnown RBP7.86□□□□□ -1.15
TPM4-209ENST00000588483 RBMS2Q15434 407 aaKnown RBP7.86□□□□□ -1.15
TPM4-209ENST00000588483 HAGHQ16775 308 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 ANKRD55Q3KP44 614 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 SLC16A13Q7RTY0 426 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms