RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 LGI3Q8N145 548 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 TXN2Q99757 166 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 B9D2Q9BPU9 175 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 C7orf50Q9BRJ6 194 aaKnown RBP12.2□□□□□ -0.46
RETREG3-206ENST00000588423 CCDC32Q9BV29 185 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 ZNF436Q9C0F3 470 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-206ENST00000588423 ENY2Q9NPA8 101 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 CACNG5Q9UF02 275 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 DUXBA0A1W2PPF3 345 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 C2orf70A6NJV1 201 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 F8W735 103 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-206ENST00000588423 CORTO00230 105 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 HOXA1P49639 335 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-206ENST00000588423 SUB1P53999 127 aaKnown RBP eCLIP12.19□□□□□ -0.46
RETREG3-206ENST00000588423 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 LCN12Q6JVE5 192 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 ADAMTSL5Q6ZMM2 481 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 HAPLN4Q86UW8 402 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 LRTM2Q8N967 370 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 PALMDQ9NP74 551 aa12.19□□□□□ -0.46
RETREG3-206ENST00000588423 OR2T8A6NH00 312 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 CENPXA8MT69 81 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 NDUFB6O95139 128 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 MT-CO2P00403 227 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 SULT1A3P0DMM9 295 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 SULT1A4P0DMN0 295 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 IL7P13232 177 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 FOLR2P14207 255 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 CCR6P51684 374 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 MFAP4P55083 255 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 ELLP55199 621 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-206ENST00000588423 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
RETREG3-206ENST00000588423 BSXQ3C1V8 233 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 NMSQ5H8A3 153 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 CENPSQ8N2Z9 138 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 TECRQ9NZ01 308 aaKnown RBP12.18□□□□□ -0.46
RETREG3-206ENST00000588423 PRR13Q9NZ81 148 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 SMAD5-AS1Q9Y6J3 95 aa12.18□□□□□ -0.46
RETREG3-206ENST00000588423 IGHV3-21A0A0B4J1V1 117 aa12.17□□□□□ -0.46
RETREG3-206ENST00000588423 TMEM213A2RRL7 107 aa12.17□□□□□ -0.46
RETREG3-206ENST00000588423 RNASE2P10153 161 aaKnown RBP12.17□□□□□ -0.46
RETREG3-206ENST00000588423 CBLN1P23435 193 aa12.17□□□□□ -0.46
RETREG3-206ENST00000588423 Q56UQ5 140 aa12.17□□□□□ -0.46
RETREG3-206ENST00000588423 LYZL2Q7Z4W2 148 aa12.17□□□□□ -0.46
RETREG3-206ENST00000588423 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
RETREG3-206ENST00000588423 ZC4H2Q9NQZ6 224 aa12.17□□□□□ -0.46
RETREG3-206ENST00000588423 UFC1Q9Y3C8 167 aa12.17□□□□□ -0.46
RETREG3-206ENST00000588423 A0A1B0GU03 582 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 ZNF320A2RRD8 509 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 NDUFA4O00483 81 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 SFT2D2O95562 160 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 CTSGP08311 255 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 VAMP1P23763 118 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 ADMP35318 185 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 HTR2BP41595 481 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 CD69Q07108 199 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 SMCO1Q147U7 214 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 UNQ9165/PRO28630Q6UXU0 137 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 UBAC2Q8NBM4 344 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 DYNLRB2Q8TF09 96 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 TMEM190Q8WZ59 177 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 CHRDL1Q9BU40 450 aa12.16□□□□□ -0.46
RETREG3-206ENST00000588423 NUPL2O15504 423 aaKnown RBP12.15□□□□□ -0.46
RETREG3-206ENST00000588423 C8orf88P0DMB2 117 aa12.15□□□□□ -0.46
RETREG3-206ENST00000588423 SLC25A6P12236 298 aa12.15□□□□□ -0.46
RETREG3-206ENST00000588423 BTCP35070 178 aa12.15□□□□□ -0.46
RETREG3-206ENST00000588423 RELQ04864 619 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-206ENST00000588423 PPP1R1AQ13522 171 aa12.15□□□□□ -0.46
RETREG3-206ENST00000588423 ANKRD55Q3KP44 614 aa12.15□□□□□ -0.46
RETREG3-206ENST00000588423 CD300EQ496F6 205 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-206ENST00000588423 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
RETREG3-206ENST00000588423 MRPL27Q9P0M9 148 aaKnown RBP12.15□□□□□ -0.46
RETREG3-206ENST00000588423 HSPB7Q9UBY9 170 aa12.15□□□□□ -0.46
RETREG3-206ENST00000588423 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 GNG7O60262 68 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 UPK1BO75841 260 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 NPBWR1P48145 328 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 TNFRSF9Q07011 255 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 C2orf83Q53S99 150 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 Q8N1Y9 231 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 DUSP18Q8NEJ0 188 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 HIPK2Q9H2X6 1198 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 HEYLQ9NQ87 328 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-206ENST00000588423 TMED3Q9Y3Q3 217 aa12.14□□□□□ -0.47
RETREG3-206ENST00000588423 IGHV3-35A0A0C4DH35 117 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 A8MZ25 164 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 K7EMT4 169 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-206ENST00000588423 EDN2P20800 178 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 TM4SF20Q53R12 229 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 GTSCR1Q86UQ5 136 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 NOXA1Q86UR1 476 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 UXS1Q8NBZ7 420 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 SLC24A4Q8NFF2 622 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
RETREG3-206ENST00000588423 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms