RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 HBG2P69892 147 aa8.87□□□□□ -0.99
VMP1-207ENST00000588131 AKIRIN2Q53H80 203 aa8.87□□□□□ -0.99
VMP1-207ENST00000588131 SLC25A24Q6NUK1 477 aa8.87□□□□□ -0.99
VMP1-207ENST00000588131 LILRB2Q8N423 598 aa8.87□□□□□ -0.99
VMP1-207ENST00000588131 FAM110DQ8TAY7 271 aaPredicted RBP8.87□□□□□ -0.99
VMP1-207ENST00000588131 ZNF418Q8TF45 676 aaPredicted RBP8.87□□□□□ -0.99
VMP1-207ENST00000588131 TAF15Q92804 592 aaKnown RBP eCLIP8.87□□□□□ -0.99
VMP1-207ENST00000588131 PINX1Q96BK5 328 aaKnown RBP8.87□□□□□ -0.99
VMP1-207ENST00000588131 MISP3Q96FF7 219 aa8.87□□□□□ -0.99
VMP1-207ENST00000588131 NOL4LQ96MY1 436 aaPredicted RBP8.87□□□□□ -0.99
VMP1-207ENST00000588131 FANCD2OSQ96PS1 177 aa8.87□□□□□ -0.99
VMP1-207ENST00000588131 PRSS22Q9GZN4 317 aa8.87□□□□□ -0.99
VMP1-207ENST00000588131 NPFFR1Q9GZQ6 430 aa8.87□□□□□ -0.99
VMP1-207ENST00000588131 FNDC4Q9H6D8 234 aaPredicted RBP8.87□□□□□ -0.99
VMP1-207ENST00000588131 NAV3Q8IVL0 2385 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 TLN2Q9Y4G6 2542 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 IGLV11-55A0A075B6I3 123 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 UBE2L5PA0A1B0GUS4 154 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 CLDN34H7C241 214 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 TRIM77I1YAP6 450 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 SOX15O60248 233 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 CRLF1O75462 422 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 SCAF4O95104 1147 aaKnown RBP8.86□□□□□ -0.99
VMP1-207ENST00000588131 CFDP00746 253 aaPredicted RBP8.86□□□□□ -0.99
VMP1-207ENST00000588131 FAM157CP0CG43 387 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 DEFA4P12838 97 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 DLK1P80370 383 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 DEFA5Q01523 94 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 IFITM2Q01629 132 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 CD69Q07108 199 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 ATP6V1FQ16864 119 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 VWC2Q2TAL6 325 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 ARSJQ5FYB0 599 aaPredicted RBP8.86□□□□□ -0.99
VMP1-207ENST00000588131 SLC51BQ86UW2 128 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 RNASEH2CQ8TDP1 164 aaKnown RBP8.86□□□□□ -0.99
VMP1-207ENST00000588131 ST8SIA2Q92186 375 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 TMEM68Q96MH6 324 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 TMEM147Q9BVK8 224 aa8.86□□□□□ -0.99
VMP1-207ENST00000588131 SONP18583 2426 aaKnown RBP8.85□□□□□ -0.99
VMP1-207ENST00000588131 IGHV3-21A0A0B4J1V1 117 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 SMCO3A2RU48 225 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 FAM181BA6NEQ2 426 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 AP4M1O00189 453 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 DFFBO76075 338 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 MT-CO2P00403 227 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 IGHV3-48P01763 117 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 RNASE1P07998 156 aaKnown RBP8.85□□□□□ -0.99
VMP1-207ENST00000588131 OPRK1P41145 380 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 UBA52P62987 128 aaKnown RBP8.85□□□□□ -0.99
VMP1-207ENST00000588131 ZNF266Q14584 549 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 SLC16A13Q7RTY0 426 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 OR2T6Q8NHC8 308 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 STOML3Q8TAV4 291 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 GGACTQ9BVM4 153 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 UQCC1Q9NVA1 299 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 MRPL36Q9P0J6 103 aaKnown RBP8.85□□□□□ -0.99
VMP1-207ENST00000588131 ZNF580Q9UK33 172 aa8.85□□□□□ -0.99
VMP1-207ENST00000588131 BORCS7-ASMTA0A0B4J1R7 106 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 I3L2K1 104 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 K7EIM0 57 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 CORTO00230 105 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 OR2J3O76001 311 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 JTBO76095 146 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 NDUFB8O95169 186 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 TPT1P13693 172 aaKnown RBP8.84□□□□□ -0.99
VMP1-207ENST00000588131 MDKP21741 143 aaPredicted RBP8.84□□□□□ -0.99
VMP1-207ENST00000588131 PPIFP30405 207 aaKnown RBP8.84□□□□□ -0.99
VMP1-207ENST00000588131 GPX4P36969 197 aaPredicted RBP8.84□□□□□ -0.99
VMP1-207ENST00000588131 RUNX1Q01196 453 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 CFHR3Q02985 330 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 GAMTQ14353 236 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 KLK9Q2XQG4 91 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 Q6ZSV7 163 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 Q8N2B8 174 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 UBAC2Q8NBM4 344 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 OR1L6Q8NGR2 347 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 GON7Q9BXV9 100 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 WDR61Q9GZS3 305 aaKnown RBP8.84□□□□□ -0.99
VMP1-207ENST00000588131 ARV1Q9H2C2 271 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 KLK9Q9UKQ9 250 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
VMP1-207ENST00000588131 HIVEP1P15822 2718 aa8.83□□□□□ -1
VMP1-207ENST00000588131 IFNA5P01569 189 aa8.83□□□□□ -1
VMP1-207ENST00000588131 FGF7P21781 194 aa8.83□□□□□ -1
VMP1-207ENST00000588131 ATP6V0CP27449 155 aa8.83□□□□□ -1
VMP1-207ENST00000588131 AKR1C1Q04828 323 aa8.83□□□□□ -1
VMP1-207ENST00000588131 EXOSC2Q13868 293 aaKnown RBP8.83□□□□□ -1
VMP1-207ENST00000588131 C10orf99Q6UWK7 81 aa8.83□□□□□ -1
VMP1-207ENST00000588131 TREML4Q6UXN2 200 aa8.83□□□□□ -1
VMP1-207ENST00000588131 BAP18Q8IXM2 172 aa8.83□□□□□ -1
VMP1-207ENST00000588131 HSD17B11Q8NBQ5 300 aa8.83□□□□□ -1
VMP1-207ENST00000588131 CACNG8Q8WXS5 425 aa8.83□□□□□ -1
VMP1-207ENST00000588131 ACY3Q96HD9 319 aa8.83□□□□□ -1
VMP1-207ENST00000588131 SLC35E1Q96K37 410 aa8.83□□□□□ -1
VMP1-207ENST00000588131 MS4A10Q96PG2 267 aa8.83□□□□□ -1
VMP1-207ENST00000588131 GINS3Q9BRX5 216 aa8.83□□□□□ -1
VMP1-207ENST00000588131 PARD6GQ9BYG4 376 aaPredicted RBP8.83□□□□□ -1
VMP1-207ENST00000588131 SH3BGRL3Q9H299 93 aa8.83□□□□□ -1
VMP1-207ENST00000588131 SLA2Q9H6Q3 261 aa8.83□□□□□ -1
VMP1-207ENST00000588131 ZNF355PQ9NSJ1 428 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms