RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 TSC22D3Q99576 134 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 NXF2Q9GZY0 626 aaKnown RBP11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 VPS13DQ5THJ4 4388 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 GNG7O60262 68 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 HPGDSO60760 199 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 LEMD1Q68G75 181 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 TOMM20LQ6UXN7 152 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 TCF24Q7RTU0 167 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 CADM3Q8N126 398 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 FAM24BQ8N5W8 94 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 CSTL1Q9H114 145 aa11.15□□□□□ -0.62
PRKCSH-204ENST00000587290 TRAV14DV4A0A0A6YYC5 116 aa11.14□□□□□ -0.63
PRKCSH-204ENST00000587290 IGKV1-5P01602 117 aa11.14□□□□□ -0.63
PRKCSH-204ENST00000587290 ELK1P19419 428 aa11.14□□□□□ -0.63
PRKCSH-204ENST00000587290 VBP1P61758 197 aa11.14□□□□□ -0.63
PRKCSH-204ENST00000587290 ZNF114Q8NC26 417 aa11.14□□□□□ -0.63
PRKCSH-204ENST00000587290 FBXL17Q9UF56 701 aa11.14□□□□□ -0.63
PRKCSH-204ENST00000587290 KLK5Q9Y337 293 aaPredicted RBP11.14□□□□□ -0.63
PRKCSH-204ENST00000587290 MPTX1A8MV57 137 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 ST8SIA3O43173 380 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 DFFBO76075 338 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 S100GP29377 79 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 RCVRNP35243 200 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 HSPE1P61604 102 aaKnown RBP11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 OR11H2Q8NH07 326 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 TP53RKQ96S44 253 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 RARRES2Q99969 163 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 ZFAND3Q9H8U3 227 aa11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 MRPL36Q9P0J6 103 aaKnown RBP11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 PUS1Q9Y606 427 aaKnown RBP eCLIP11.13□□□□□ -0.63
PRKCSH-204ENST00000587290 A0A1B0GU03 582 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 CA1P00915 261 aaPredicted RBP11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 APOA1P02647 267 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 PGAM2P15259 253 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 DEFB131AP59861 70 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 LPCAT3Q6P1A2 487 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 TMEM217Q8N7C4 229 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 CMTM3Q96MX0 182 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 TXN2Q99757 166 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 C6orf62Q9GZU0 229 aaPredicted RBP11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 MS4A6AQ9H2W1 248 aa11.12□□□□□ -0.63
PRKCSH-204ENST00000587290 A0A087WXM4 84 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 A0A0B4J293 547 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 A0A0G2JRQ6 117 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 SMIM31A0A1B0GVY4 71 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 PPP5CP53041 499 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 UCP3P55916 312 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 ERHP84090 104 aaKnown RBP11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 SP6Q3SY56 376 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 SLC35G3Q8N808 338 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 SCPEP1Q9HB40 452 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 FAM212BQ9NTI7 297 aaPredicted RBP11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 KLK11Q9UBX7 282 aa11.11□□□□□ -0.63
PRKCSH-204ENST00000587290 P0C879 139 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 ETV6P41212 452 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 AKR1C2P52895 323 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 PIGPP57054 158 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 MLANAQ16655 118 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 OR4D10Q8NGI6 311 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 OR52I2Q8NH67 350 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 C11orf45Q8TAV5 145 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 GINS3Q9BRX5 216 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 NAA50Q9GZZ1 169 aaKnown RBP11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 FNDC4Q9H6D8 234 aaPredicted RBP11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 VSIRQ9H7M9 311 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 VCX3AQ9NNX9 186 aa11.1□□□□□ -0.63
PRKCSH-204ENST00000587290 DNAH6Q9C0G6 4158 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 FAM25AB3EWG3 89 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 FAM25CB3EWG5 89 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 FAM25GB3EWG6 89 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 DNASE2O00115 360 aaPredicted RBP11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 IFNA17P01571 189 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 CD3DP04234 171 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 HOXA1P49639 335 aaPredicted RBP11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 PRR20EP86478 221 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 PRR20CP86479 221 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 PRR20DP86480 221 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 PRR20BP86481 221 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 PRR20AP86496 221 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 RBMS2Q15434 407 aaKnown RBP11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 ZNF600Q6ZNG1 722 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 LHFPL1Q86WI0 220 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 DUSP18Q8NEJ0 188 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 GATAD1Q8WUU5 269 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 KRTAP17-1Q9BYP8 105 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 RABAC1Q9UI14 185 aa11.09□□□□□ -0.63
PRKCSH-204ENST00000587290 TNFAIP8O95379 198 aa11.08□□□□□ -0.64
PRKCSH-204ENST00000587290 TMEM50AO95807 157 aa11.08□□□□□ -0.64
PRKCSH-204ENST00000587290 SNCAP37840 140 aa11.08□□□□□ -0.64
PRKCSH-204ENST00000587290 NPBWR1P48145 328 aa11.08□□□□□ -0.64
PRKCSH-204ENST00000587290 RND3P61587 244 aa11.08□□□□□ -0.64
PRKCSH-204ENST00000587290 PAFAH1B2P68402 229 aa11.08□□□□□ -0.64
PRKCSH-204ENST00000587290 RNASE10Q5GAN6 216 aaKnown RBP11.08□□□□□ -0.64
PRKCSH-204ENST00000587290 STXBP6Q8NFX7 210 aa11.08□□□□□ -0.64
PRKCSH-204ENST00000587290 C11orf68Q9H3H3 251 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms