RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 HOXA1P49639 335 aaPredicted RBP6.22□□□□□ -1.41
VMP1-204ENST00000587259 HSPE1P61604 102 aaKnown RBP6.22□□□□□ -1.41
VMP1-204ENST00000587259 SERF2P84101 59 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 SLC38A11Q08AI6 406 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 CLINT1Q14677 625 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 LHFPL4Q7Z7J7 247 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 TMEM219Q86XT9 240 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 DYNAPQ8N1N2 210 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 C11orf42Q8N5U0 333 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 OR11H6Q8NGC7 330 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 PIFOQ8TCI5 191 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 CITED4Q96RK1 184 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 CITED2Q99967 270 aaPredicted RBP6.22□□□□□ -1.41
VMP1-204ENST00000587259 TMEM147Q9BVK8 224 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 MRPL20Q9BYC9 149 aaKnown RBP6.22□□□□□ -1.41
VMP1-204ENST00000587259 ZNF702PQ9H963 129 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 PLEKHA3Q9HB20 300 aa6.22□□□□□ -1.41
VMP1-204ENST00000587259 HEYLQ9NQ87 328 aaPredicted RBP6.22□□□□□ -1.41
VMP1-204ENST00000587259 MFSD2BA6NFX1 497 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 C17orf112F2Z3M2 114 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 INS-IGF2F8WCM5 200 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 H3BP45 60 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 UPK2O00526 184 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 FBXO24O75426 580 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 TMEM50AO95807 157 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 HBE1P02100 147 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 MBP02144 154 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 PRH1P02810 166 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 OR9G9P0C7N8 305 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 METTL15P1P0C7V9 234 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 COX7A1P24310 79 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 HTR1DP28221 377 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 MAS1LP35410 378 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 CAMLGP49069 296 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 UBE2E1P51965 193 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 OR2B8PP59922 312 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 RPL8P62917 257 aaKnown RBP6.21□□□□□ -1.42
VMP1-204ENST00000587259 PRCDQ00LT1 54 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 TMEM267Q0VDI3 215 aaPredicted RBP6.21□□□□□ -1.42
VMP1-204ENST00000587259 IZUMO4Q1ZYL8 232 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 FAM74A1Q5RGS3 127 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 AKR1C8PQ5T2L2 129 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 MINOS1Q5TGZ0 78 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 SSX9Q7RTT3 188 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 TMEM217Q8N7C4 229 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 TEX45Q8NA69 505 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 HSD17B11Q8NBQ5 300 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 SLC24A4Q8NFF2 622 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 OR5R1Q8NH85 324 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 OR2T6Q8NHC8 308 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 TMEM167AQ8TBQ9 72 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 MARC2Q969Z3 335 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 QTRT1Q9BXR0 403 aaKnown RBP6.21□□□□□ -1.42
VMP1-204ENST00000587259 COMMD5Q9GZQ3 224 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 SERTAD4Q9NUC0 356 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 UQCC1Q9NVA1 299 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 TCF19Q9Y242 345 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 FBXO7Q9Y3I1 522 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 TBL2Q9Y4P3 447 aaKnown RBP6.21□□□□□ -1.42
VMP1-204ENST00000587259 OR51B2Q9Y5P1 312 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 MINOS1-NBL1R4GNA1 71 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 DNAH3Q8TD57 4116 aa6.21□□□□□ -1.42
VMP1-204ENST00000587259 SCO2A0A1W2PP80 73 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 WI2-2373I1.2A0A1W2PRP0 233 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 ANKRD34BA5PLL1 514 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 I3L521 148 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 ACTL6BO94805 426 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 IFNA10P01566 189 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 IGKV1-16P04430 117 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 IL6RP08887 468 aaPredicted RBP6.2□□□□□ -1.42
VMP1-204ENST00000587259 SAA1P0DJI8 122 aaPredicted RBP6.2□□□□□ -1.42
VMP1-204ENST00000587259 ZP3P21754 424 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 NPY1RP25929 384 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 ATP6V0CP27449 155 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 SUB1P53999 127 aaKnown RBP eCLIP6.2□□□□□ -1.42
VMP1-204ENST00000587259 KRTAP10-11P60412 298 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 RPS16P62249 146 aaKnown RBP6.2□□□□□ -1.42
VMP1-204ENST00000587259 DLK1P80370 383 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 ERHP84090 104 aaKnown RBP6.2□□□□□ -1.42
VMP1-204ENST00000587259 AANATQ16613 207 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 VWC2Q2TAL6 325 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 LRRC75BQ2VPJ9 315 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 DEFB121Q5J5C9 76 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 LDLRAD2Q5SZI1 272 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 PXDC1Q5TGL8 231 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 Q6ZRG5 221 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 REC114Q7Z4M0 266 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 MMD2Q8IY49 270 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 ZNF709Q8N972 641 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 OR1L8Q8NGR8 309 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 OR2G3Q8NGZ4 309 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 CXorf58Q96LI9 332 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 SRSF8Q9BRL6 282 aaKnown RBP6.2□□□□□ -1.42
VMP1-204ENST00000587259 PBDC1Q9BVG4 233 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 WDR61Q9GZS3 305 aaKnown RBP6.2□□□□□ -1.42
VMP1-204ENST00000587259 SMDT1Q9H4I9 107 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 DPM3Q9P2X0 92 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 TENM3Q9P273 2699 aa6.2□□□□□ -1.42
VMP1-204ENST00000587259 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 UBE2L5PA0A1B0GUS4 154 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms