RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 PRSS54Q6PEW0 395 aa13.21□□□□□ -0.3
PRKCSH-203ENST00000586486 RNASEH2CQ8TDP1 164 aaKnown RBP13.21□□□□□ -0.3
PRKCSH-203ENST00000586486 OR4C12Q96R67 309 aa13.21□□□□□ -0.3
PRKCSH-203ENST00000586486 OR5AC2Q9NZP5 309 aa13.21□□□□□ -0.3
PRKCSH-203ENST00000586486 STRAPQ9Y3F4 350 aaKnown RBP13.21□□□□□ -0.3
PRKCSH-203ENST00000586486 TRAV14DV4A0A0A6YYC5 116 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 H3BP45 60 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 OR2J3O76001 311 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 RPLP1P05386 114 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 LYL1P12980 280 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 KRTAP10-3P60369 221 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 KIAA0141Q14154 515 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 LCNL1Q6ZST4 164 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 OR2T35Q8NGX2 323 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 USMG5Q96IX5 58 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 RNF126Q9BV68 326 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 LYRM2Q9NU23 88 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 FBXL7Q9UJT9 491 aa13.2□□□□□ -0.3
PRKCSH-203ENST00000586486 A0A0G2JLM5 398 aa13.19□□□□□ -0.3
PRKCSH-203ENST00000586486 CD28P10747 220 aa13.19□□□□□ -0.3
PRKCSH-203ENST00000586486 RAB11AP62491 216 aa13.19□□□□□ -0.3
PRKCSH-203ENST00000586486 EXOSC2Q13868 293 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-203ENST00000586486 TMEM14EPQ6UXP3 125 aa13.19□□□□□ -0.3
PRKCSH-203ENST00000586486 RANGRFQ9HD47 186 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-203ENST00000586486 MBD2Q9UBB5 411 aa13.19□□□□□ -0.3
PRKCSH-203ENST00000586486 G3V3Q6 166 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 OR8U8P0C7N1 319 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 P2RY1P47900 373 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 C15orf32Q32M92 178 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 ZNF491Q8N8L2 437 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 VN1R17PQ8TDU5 208 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 ST6GAL2Q96JF0 529 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 UBE2E2Q96LR5 201 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 TENM1Q9UKZ4 2725 aa13.18□□□□□ -0.3
PRKCSH-203ENST00000586486 I3L2K1 104 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 K7EIM0 57 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 SCAF4O95104 1147 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 NDUFB8O95169 186 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 CDX1P47902 265 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 CAV2P51636 162 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 CXorf58Q96LI9 332 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 CITED1Q99966 193 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 PRSS46E5RG02 174 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 CCNKO75909 580 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 IFNA4P05014 189 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 SLC25A4P12235 298 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 DEFA5Q01523 94 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 ATP5G2Q06055 141 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 KRTAP21-3Q3LHN1 58 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 Q5BKY6 102 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 ETV3LQ6ZN32 361 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 AKAP14Q86UN6 197 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 CITED2Q99967 270 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 ZNF747Q9BV97 191 aa13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-203ENST00000586486 COL6A5A8TX70 2615 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 RPS10-NUDT3A0A1W2PQS6 291 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 TCRBV4S1A1TA0A5B7 111 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 PMS2P5A8MQ11 134 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 MT-CO2P00403 227 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 OPRK1P41145 380 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 TCTE3Q8IZS6 198 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 TMEM252Q8N6L7 170 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 C11orf44Q8N8P7 122 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 PINX1Q96BK5 328 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 ATP6V0BQ99437 205 aa13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 FNDC4Q9H6D8 234 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 PAIP2BQ9ULR5 123 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-203ENST00000586486 MFSD2BA6NFX1 497 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 FAM24AA6NFZ4 105 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 METTL15P1P0C7V9 234 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 CD69Q07108 199 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 FAM209BQ5JX69 171 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 ETFRF1Q6IPR1 90 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 C12orf54Q6X4T0 127 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 SCARB1Q8WTV0 552 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 DCUN1D4Q92564 292 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 EEF1AKMT3Q96AZ1 226 aa13.15□□□□□ -0.3
PRKCSH-203ENST00000586486 TRBV7-1A0A0A6YYK4 115 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 IGSF23A1L1A6 192 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 LGALS1P09382 135 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 FCGR2BP31994 310 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 GPX4P36969 197 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 SULT1A1P50225 295 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 RUNX1Q01196 453 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 KHDC1LQ5JSQ8 128 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 NDUFA11Q86Y39 141 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 STX12Q86Y82 276 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 ZNF502Q8TBZ5 544 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 C4orf3Q8WVX3 66 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 CACNG8Q8WXS5 425 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 SLC25A31Q9H0C2 315 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 C21orf62Q9NYP8 219 aa13.14□□□□□ -0.31
PRKCSH-203ENST00000586486 BAXQ07812 192 aa13.13□□□□□ -0.31
PRKCSH-203ENST00000586486 SLC16A13Q7RTY0 426 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms