RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 IGHV3-74A0A0B4J1X5 117 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 GPR31O00270 319 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 DFFBO76075 338 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 MT-CO2P00403 227 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 IGHV3-48P01763 117 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 APOHP02749 345 aaPredicted RBP10.54□□□□□ -0.72
SDF2-202ENST00000585428 TMEM187Q14656 261 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 TOMM20LQ6UXN7 152 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 TCF24Q7RTU0 167 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 TSPAN14Q8NG11 270 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 MISP3Q96FF7 219 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 MS4A6AQ9H2W1 248 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 HRH4Q9H3N8 390 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 IFT46Q9NQC8 304 aa10.54□□□□□ -0.72
SDF2-202ENST00000585428 HECTD4Q9Y4D8 3996 aa10.53□□□□□ -0.72
SDF2-202ENST00000585428 LOC100506127A0A0U1RQW1 187 aa10.53□□□□□ -0.72
SDF2-202ENST00000585428 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
SDF2-202ENST00000585428 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
SDF2-202ENST00000585428 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
SDF2-202ENST00000585428 GIG44P09565 113 aaPredicted RBP10.53□□□□□ -0.72
SDF2-202ENST00000585428 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
SDF2-202ENST00000585428 Q8NAQ8 132 aa10.53□□□□□ -0.72
SDF2-202ENST00000585428 DUSP18Q8NEJ0 188 aa10.53□□□□□ -0.72
SDF2-202ENST00000585428 ST8SIA2Q92186 375 aa10.53□□□□□ -0.72
SDF2-202ENST00000585428 TRAV2A0A0B4J234 112 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 IGLL5B9A064 214 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 C11orf94C9JXX5 98 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 GNG7O60262 68 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 RBMY1A1P0DJD3 496 aaKnown RBP10.52□□□□□ -0.73
SDF2-202ENST00000585428 RBMY1CP0DJD4 496 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 TAS2R46P59540 309 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 DEFB131AP59861 70 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 HSPE1P61604 102 aaKnown RBP10.52□□□□□ -0.73
SDF2-202ENST00000585428 PRCDQ00LT1 54 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 RBMY1FQ15415 496 aaKnown RBP10.52□□□□□ -0.73
SDF2-202ENST00000585428 FAM24BQ8N5W8 94 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 OR5H2Q8NGV7 314 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 FXYD6Q9H0Q3 95 aa10.52□□□□□ -0.73
SDF2-202ENST00000585428 KIAA1109Q2LD37 5005 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 VPS13DQ5THJ4 4388 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 DNASE2O00115 360 aaPredicted RBP10.51□□□□□ -0.73
SDF2-202ENST00000585428 TMEM50AO95807 157 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 LEMD1Q68G75 181 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 PVRIGQ6DKI7 326 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 LPCAT3Q6P1A2 487 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 H2BFWTQ7Z2G1 175 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 OR4A16Q8NH70 328 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 GINS3Q9BRX5 216 aa10.51□□□□□ -0.73
SDF2-202ENST00000585428 ST8SIA3O43173 380 aa10.5□□□□□ -0.73
SDF2-202ENST00000585428 PRSS3P35030 304 aa10.5□□□□□ -0.73
SDF2-202ENST00000585428 HRH1P35367 487 aa10.5□□□□□ -0.73
SDF2-202ENST00000585428 RPS19P39019 145 aaKnown RBP10.5□□□□□ -0.73
SDF2-202ENST00000585428 NPBWR1P48145 328 aa10.5□□□□□ -0.73
SDF2-202ENST00000585428 TAS2R20P59543 309 aa10.5□□□□□ -0.73
SDF2-202ENST00000585428 ERHP84090 104 aaKnown RBP10.5□□□□□ -0.73
SDF2-202ENST00000585428 PHLDA2Q53GA4 152 aa10.5□□□□□ -0.73
SDF2-202ENST00000585428 TBC1D26Q86UD7 250 aa10.5□□□□□ -0.73
SDF2-202ENST00000585428 CROCCP3Q8IVE0 287 aa10.5□□□□□ -0.73
SDF2-202ENST00000585428 PINX1Q96BK5 328 aaKnown RBP10.5□□□□□ -0.73
SDF2-202ENST00000585428 IGHV3-66A0A0C4DH42 116 aa10.49□□□□□ -0.73
SDF2-202ENST00000585428 A0A1B0GU03 582 aa10.49□□□□□ -0.73
SDF2-202ENST00000585428 INS-IGF2F8WCM5 200 aa10.49□□□□□ -0.73
SDF2-202ENST00000585428 HLA-DMAP28067 261 aa10.49□□□□□ -0.73
SDF2-202ENST00000585428 UCP3P55916 312 aa10.49□□□□□ -0.73
SDF2-202ENST00000585428 UBE2NLQ5JXB2 153 aa10.49□□□□□ -0.73
SDF2-202ENST00000585428 TMEM69Q5SWH9 247 aa10.49□□□□□ -0.73
SDF2-202ENST00000585428 ZNF600Q6ZNG1 722 aa10.49□□□□□ -0.73
SDF2-202ENST00000585428 TRPT1Q86TN4 253 aaKnown RBP10.49□□□□□ -0.73
SDF2-202ENST00000585428 PUS1Q9Y606 427 aaKnown RBP eCLIP10.49□□□□□ -0.73
SDF2-202ENST00000585428 ZNF705EA8MWA4 302 aaPredicted RBP10.48□□□□□ -0.73
SDF2-202ENST00000585428 K7EQG2 157 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 EIF4EP06730 217 aaKnown RBP10.48□□□□□ -0.73
SDF2-202ENST00000585428 MIFP14174 115 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 NPPCP23582 126 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 TGFBR1P36897 503 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 RPL11P62913 178 aaKnown RBP10.48□□□□□ -0.73
SDF2-202ENST00000585428 TMEM41BQ5BJD5 291 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 STHQ8IWL8 128 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 GPX8Q8TED1 209 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 X6R8D5 127 aa10.48□□□□□ -0.73
SDF2-202ENST00000585428 ELOA3CA0A087WX78 387 aaPredicted RBP10.47□□□□□ -0.73
SDF2-202ENST00000585428 A0A0B4J293 547 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 IGHV4-28A0A0C4DH34 117 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 CRYBB3P26998 211 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 HLA-DMBP28068 263 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 S100GP29377 79 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 TSPAN5P62079 268 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 MLANAQ16655 118 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 IZUMO4Q1ZYL8 232 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
SDF2-202ENST00000585428 SAMD12Q8N8I0 201 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 MRGPRFQ96AM1 343 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 GRAMD2BQ96HH9 432 aa10.47□□□□□ -0.73
SDF2-202ENST00000585428 A0A1W2PS18 150 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 P0C879 139 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 SPP1P10451 314 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 SNCAP37840 140 aa10.46□□□□□ -0.73
SDF2-202ENST00000585428 NEDD8Q15843 81 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms