RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TMEM144Q7Z5S9 345 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 LHFPL4Q7Z7J7 247 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 ZNF114Q8NC26 417 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 OR1L6Q8NGR2 347 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 TMEM170AQ8WVE7 144 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 EAF1Q96JC9 268 aaPredicted RBP8.31□□□□□ -1.08
LIG3-203ENST00000585370 RITA1Q96K30 269 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 RPRMQ9NS64 109 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 TMEM160Q9NX00 188 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 CDC42EP3Q9UKI2 254 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 TMEM218A2RU14 115 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 SMCO3A2RU48 225 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 NPFFO15130 113 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 IGKV1D-33P01593 117 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 IGKV1-33P01594 117 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 OPN1MWP04001 364 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 CD5P06127 495 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 MSMBP08118 114 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 OPN1MW2P0DN77 364 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 OPN1MW3P0DN78 364 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 OR13C7P0DN81 318 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 MYOD1P15172 320 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 M6PRP20645 277 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 TAGLN2P37802 199 aaKnown RBP8.3□□□□□ -1.08
LIG3-203ENST00000585370 CD69Q07108 199 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 MMDQ15546 238 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 TNXAQ16473 311 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 MRGPRG-AS1Q2M3A8 158 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 TUSC1Q2TAM9 212 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 FFAR4Q5NUL3 377 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 PVRIGQ6DKI7 326 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 BPIFCQ8NFQ6 507 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 SFT2D1Q8WV19 159 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 ACTR3CQ9C0K3 210 aaPredicted RBP8.3□□□□□ -1.08
LIG3-203ENST00000585370 TREM1Q9NP99 234 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 SLC39A9Q9NUM3 307 aa8.3□□□□□ -1.08
LIG3-203ENST00000585370 LSM4Q9Y4Z0 139 aaKnown RBP8.3□□□□□ -1.08
LIG3-203ENST00000585370 IGHV1-69DA0A0B4J2H0 117 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 CENPVL3A0A0U1RRI6 287 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 CTXND1A0A1B0GTU2 59 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 NDUFS6O75380 124 aaKnown RBP8.29□□□□□ -1.08
LIG3-203ENST00000585370 IGHV1-69P01742 117 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 RPL29P47914 159 aaKnown RBP8.29□□□□□ -1.08
LIG3-203ENST00000585370 FHITP49789 147 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 BPIFB3P59826 476 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 PRB3Q04118 309 aaPredicted RBP8.29□□□□□ -1.08
LIG3-203ENST00000585370 AKR1C1Q04828 323 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 HES1Q14469 280 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 GUK1Q16774 197 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 C5orf64Q2M2E5 130 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 SPSB3Q6PJ21 355 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 CCDC28AQ8IWP9 274 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 Q8N6K4 173 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 OR10W1Q8NGF6 305 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 OR10G4Q8NGN3 311 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 OR10G9Q8NGN4 311 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 OR10G7Q8NGN6 311 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 OR1P1Q8NH06 330 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 SLC35E1Q96K37 410 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 C19orf24Q9BVV8 132 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 FBXL15Q9H469 300 aa8.29□□□□□ -1.08
LIG3-203ENST00000585370 A0A1W2PRD5 423 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 A0A1W2PRF3 423 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 A0A1W2PRM7 423 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 IGLC7A0M8Q6 106 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 RBFOX3A6NFN3 312 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 CGB1A6NKQ9 187 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 J3QLI3 93 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 CNIH1O95406 144 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 IFNA1P01562 189 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 TMEM11P17152 192 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 CNTFRP26992 372 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 PPT1P50897 306 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 WT1-ASQ06250 92 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 KRTAP24-1Q3LI83 254 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 ARSJQ5FYB0 599 aaPredicted RBP8.28□□□□□ -1.08
LIG3-203ENST00000585370 ZNF562Q6V9R5 426 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 RBMS3Q6XE24 437 aaKnown RBP8.28□□□□□ -1.08
LIG3-203ENST00000585370 LINC01356Q8N9X3 169 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 SRSF12Q8WXF0 261 aaKnown RBP8.28□□□□□ -1.08
LIG3-203ENST00000585370 RCC1LQ96I51 464 aaKnown RBP8.28□□□□□ -1.08
LIG3-203ENST00000585370 NARS2Q96I59 477 aaKnown RBP8.28□□□□□ -1.08
LIG3-203ENST00000585370 LINC00052Q96N35 136 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 P2RX4Q99571 388 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 SEC11CQ9BY50 192 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 EIF5A2Q9GZV4 153 aaKnown RBP8.28□□□□□ -1.08
LIG3-203ENST00000585370 TPSG1Q9NRR2 321 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 RFNGQ9Y644 331 aa8.28□□□□□ -1.08
LIG3-203ENST00000585370 TET2Q6N021 2002 aaPredicted RBP8.28□□□□□ -1.08
LIG3-203ENST00000585370 A0A1W2PPV4 95 aa8.27□□□□□ -1.09
LIG3-203ENST00000585370 SEC14L6B5MCN3 397 aa8.27□□□□□ -1.09
LIG3-203ENST00000585370 E7EUB6 86 aa8.27□□□□□ -1.09
LIG3-203ENST00000585370 AGPAT2O15120 278 aa8.27□□□□□ -1.09
LIG3-203ENST00000585370 SAA4P35542 130 aa8.27□□□□□ -1.09
LIG3-203ENST00000585370 ELLP55199 621 aaPredicted RBP8.27□□□□□ -1.09
LIG3-203ENST00000585370 SRSF2Q01130 221 aaKnown RBP8.27□□□□□ -1.09
LIG3-203ENST00000585370 GAMTQ14353 236 aa8.27□□□□□ -1.09
LIG3-203ENST00000585370 HNF4GQ14541 408 aa8.27□□□□□ -1.09
LIG3-203ENST00000585370 FXYD3Q14802 87 aa8.27□□□□□ -1.09
LIG3-203ENST00000585370 KHDC3LQ587J8 217 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms