RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 EWSR1Q01844 656 aaKnown RBP eCLIP7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 LGALSLQ3ZCW2 172 aaPredicted RBP7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 AKIRIN2Q53H80 203 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 HAPLN4Q86UW8 402 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 TTC9CQ8N5M4 171 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 SLC24A4Q8NFF2 622 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 HINT2Q9BX68 163 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 NPFFR1Q9GZQ6 430 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 MFFQ9GZY8 342 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 SLC25A31Q9H0C2 315 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 ZNF702PQ9H963 129 aa7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 TMA7Q9Y2S6 64 aaKnown RBP7.76□□□□□ -1.17
SMCHD1-212ENST00000585229 A0A0D9SG52 128 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 SH2D7A6NKC9 451 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 LINC01548A6NM66 108 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 H3BP45 60 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 BRI3O95415 125 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 OR13C7P0DN81 318 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 NUP62P37198 522 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 CAV2P51636 162 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 NKX2-5P52952 324 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 SPANXN5Q5MJ07 72 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 Q71RC1 249 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 SLC35E3Q7Z769 313 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 INO80EQ8NBZ0 244 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 OR1P1Q8NH06 330 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 FAM110DQ8TAY7 271 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 JMJD8Q96S16 334 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 P2RX4Q99571 388 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 FAM103A1Q9BTL3 118 aaKnown RBP7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 PARP11Q9NR21 331 aa7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 F11RQ9Y624 299 aaKnown RBP7.75□□□□□ -1.17
SMCHD1-212ENST00000585229 AP4M1O00189 453 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 IFNA10P01566 189 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 SNCAP37840 140 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 SUB1P53999 127 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 MFAP2P55001 183 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 UBA52P62987 128 aaKnown RBP7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 CFHR3Q02985 330 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 ARL16Q0P5N6 197 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 TMEM267Q0VDI3 215 aaPredicted RBP7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 STX12Q86Y82 276 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 OR1L6Q8NGR2 347 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 RNASEH2CQ8TDP1 164 aaKnown RBP7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 ABHD5Q8WTS1 349 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 BSCL2Q96G97 398 aaPredicted RBP7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 PRSS22Q9GZN4 317 aa7.74□□□□□ -1.17
SMCHD1-212ENST00000585229 TRAV41A0A0B4J266 112 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 FNDC10F2Z333 226 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 H3BUA1 57 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 TRIM77I1YAP6 450 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 TAAR5O14804 337 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 BCL2L11O43521 198 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 TSPAN9O75954 239 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 OR8U8P0C7N1 319 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 METTL15P1P0C7V9 234 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 PPIFP30405 207 aaKnown RBP7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 S100A11P31949 105 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 RAB11AP62491 216 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 HBG1P69891 147 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 HBG2P69892 147 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 NHLH2Q02577 135 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 ATP6V1FQ16864 119 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 VWC2Q2TAL6 325 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 UNQ5815/PRO19632Q6UWF5 114 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 ETV3LQ6ZN32 361 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 TMUB2Q71RG4 321 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 LFNGQ8NES3 379 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 GGACTQ9BVM4 153 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 TNFRSF19Q9NS68 423 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 FBXL17Q9UF56 701 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 DMRT1Q9Y5R6 373 aa7.73□□□□□ -1.17
SMCHD1-212ENST00000585229 IGLV11-55A0A075B6I3 123 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 TRBV9A0A0B4J1U6 114 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 CORTO00230 105 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 SOX15O60248 233 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 CST7O76096 145 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 REG1AP05451 166 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 HIST1H1BP16401 226 aaKnown RBP7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 C4BPBP20851 252 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 MDKP21741 143 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 GPX4P36969 197 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 DLK1P80370 383 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 CD69Q07108 199 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 SLC38A11Q08AI6 406 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 EXOSC2Q13868 293 aaKnown RBP7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 ECSCRQ19T08 205 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 C9orf152Q5JTZ5 239 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 Q6ZSV7 163 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 OR10P1Q8NGE3 313 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 OR1S2Q8NGQ3 325 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 PINX1Q96BK5 328 aaKnown RBP7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 CCDC140Q96MF4 163 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 DUX5Q96PT3 197 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 ARPC5LQ9BPX5 153 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 PARD6GQ9BYG4 376 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 ARL6Q9H0F7 186 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 C16orf95Q9H693 158 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 CYTL1Q9NRR1 136 aa7.72□□□□□ -1.17
SMCHD1-212ENST00000585229 NF1P21359 2839 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms