RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 FAM219AQ8IW50 185 aa13.44□□□□□ -0.26
ERBB2-221ENST00000584888 RBPMSQ93062 196 aaKnown RBP13.44□□□□□ -0.26
ERBB2-221ENST00000584888 RRNAD1Q96FB5 475 aaKnown RBP13.44□□□□□ -0.26
ERBB2-221ENST00000584888 BSCL2Q96G97 398 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-221ENST00000584888 SCGB3A2Q96PL1 93 aa13.44□□□□□ -0.26
ERBB2-221ENST00000584888 CHRDL1Q9BU40 450 aa13.44□□□□□ -0.26
ERBB2-221ENST00000584888 PLEKHA3Q9HB20 300 aa13.44□□□□□ -0.26
ERBB2-221ENST00000584888 PALMDQ9NP74 551 aa13.44□□□□□ -0.26
ERBB2-221ENST00000584888 OR2T8A6NH00 312 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 ELLP55199 621 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-221ENST00000584888 SUPT4H1P63272 117 aaKnown RBP13.43□□□□□ -0.26
ERBB2-221ENST00000584888 ERHP84090 104 aaKnown RBP13.43□□□□□ -0.26
ERBB2-221ENST00000584888 TMEM187Q14656 261 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 HAGHQ16775 308 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 TM4SF20Q53R12 229 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 SPINK9Q5DT21 86 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 DEDD2Q8WXF8 326 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 CACNG8Q8WXS5 425 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 TUBA4BQ9H853 241 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 MCUBQ9NWR8 336 aa13.43□□□□□ -0.26
ERBB2-221ENST00000584888 ZNF320A2RRD8 509 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 CTSGP08311 255 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 UXS1Q8NBZ7 420 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 OR52E5Q8NH55 327 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 IL22RA2Q969J5 263 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 GPR146Q96CH1 333 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 TXN2Q99757 166 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 SPATA25Q9BR10 227 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 EDA2RQ9HAV5 297 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 MLXQ9UH92 298 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 TENM2Q9NT68 2774 aa13.42□□□□□ -0.26
ERBB2-221ENST00000584888 IGHV3-35A0A0C4DH35 117 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 IFNA17P01571 189 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 RNASE2P10153 161 aaKnown RBP13.41□□□□□ -0.26
ERBB2-221ENST00000584888 AP3S2P59780 193 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 BSXQ3C1V8 233 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 ZFAND6Q6FIF0 208 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 TOMM5Q8N4H5 51 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 DYNLRB2Q8TF09 96 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 TMEM190Q8WZ59 177 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 MARC2Q969Z3 335 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 SRRQ9GZT4 340 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.41□□□□□ -0.26
ERBB2-221ENST00000584888 KCNIP3Q9Y2W7 256 aa13.41□□□□□ -0.26
ERBB2-221ENST00000584888 NDUFA4O00483 81 aa13.4□□□□□ -0.26
ERBB2-221ENST00000584888 MT-CO2P00403 227 aa13.4□□□□□ -0.26
ERBB2-221ENST00000584888 FAUP35544 74 aaKnown RBP13.4□□□□□ -0.26
ERBB2-221ENST00000584888 MFAP4P55083 255 aa13.4□□□□□ -0.26
ERBB2-221ENST00000584888 SPCS3P61009 180 aa13.4□□□□□ -0.26
ERBB2-221ENST00000584888 TMEM268Q5VZI3 342 aa13.4□□□□□ -0.26
ERBB2-221ENST00000584888 SLC35G3Q8N808 338 aa13.4□□□□□ -0.26
ERBB2-221ENST00000584888 MISP3Q96FF7 219 aa13.4□□□□□ -0.26
ERBB2-221ENST00000584888 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
ERBB2-221ENST00000584888 UFC1Q9Y3C8 167 aa13.4□□□□□ -0.26
ERBB2-221ENST00000584888 SPANXN2Q5MJ10 180 aa13.39□□□□□ -0.27
ERBB2-221ENST00000584888 ZNF57Q68EA5 555 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-221ENST00000584888 SDHCQ99643 169 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-221ENST00000584888 GAR1Q9NY12 217 aaKnown RBP13.39□□□□□ -0.27
ERBB2-221ENST00000584888 NDUFA13Q9P0J0 144 aa13.39□□□□□ -0.27
ERBB2-221ENST00000584888 DNAH7Q8WXX0 4024 aa13.39□□□□□ -0.27
ERBB2-221ENST00000584888 K7EMT4 169 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 AKR1C4P17516 323 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 SNCAP37840 140 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 CD81P60033 236 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 Q56UQ5 140 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 TMEM61Q8N0U2 210 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
ERBB2-221ENST00000584888 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
ERBB2-221ENST00000584888 PDCD10Q9BUL8 212 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 PRR13Q9NZ81 148 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 CACNG5Q9UF02 275 aa13.38□□□□□ -0.27
ERBB2-221ENST00000584888 TRAV25A0A0B4J276 109 aa13.37□□□□□ -0.27
ERBB2-221ENST00000584888 IGHV3-48P01763 117 aa13.37□□□□□ -0.27
ERBB2-221ENST00000584888 CD7P09564 240 aa13.37□□□□□ -0.27
ERBB2-221ENST00000584888 BAK1Q16611 211 aa13.37□□□□□ -0.27
ERBB2-221ENST00000584888 NMSQ5H8A3 153 aa13.37□□□□□ -0.27
ERBB2-221ENST00000584888 LINC00322Q6ZN03 302 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-221ENST00000584888 UBAC2Q8NBM4 344 aa13.37□□□□□ -0.27
ERBB2-221ENST00000584888 SLC25A21Q9BQT8 299 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-221ENST00000584888 NEURL2Q9BR09 285 aa13.37□□□□□ -0.27
ERBB2-221ENST00000584888 SELENOKQ9Y6D0 94 aa13.37□□□□□ -0.27
ERBB2-221ENST00000584888 A0A0B4J2A0 478 aa13.36□□□□□ -0.27
ERBB2-221ENST00000584888 LCE6AA0A183 80 aa13.36□□□□□ -0.27
ERBB2-221ENST00000584888 HOXA1P49639 335 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-221ENST00000584888 SUB1P53999 127 aaKnown RBP eCLIP13.36□□□□□ -0.27
ERBB2-221ENST00000584888 TMEM128Q5BJH2 165 aa13.36□□□□□ -0.27
ERBB2-221ENST00000584888 BTNL8Q6UX41 500 aa13.36□□□□□ -0.27
ERBB2-221ENST00000584888 LYZL2Q7Z4W2 148 aa13.36□□□□□ -0.27
ERBB2-221ENST00000584888 PINX1Q96BK5 328 aaKnown RBP13.36□□□□□ -0.27
ERBB2-221ENST00000584888 OR10C1Q96KK4 312 aa13.36□□□□□ -0.27
ERBB2-221ENST00000584888 FNDC4Q9H6D8 234 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-221ENST00000584888 DAZ1Q9NQZ3 744 aaKnown RBP13.36□□□□□ -0.27
ERBB2-221ENST00000584888 SHPKQ9UHJ6 478 aa13.36□□□□□ -0.27
ERBB2-221ENST00000584888 C15orf62A8K5M9 175 aa13.35□□□□□ -0.27
ERBB2-221ENST00000584888 CORTO00230 105 aa13.35□□□□□ -0.27
ERBB2-221ENST00000584888 NUPL2O15504 423 aaKnown RBP13.35□□□□□ -0.27
ERBB2-221ENST00000584888 SULT1A3P0DMM9 295 aa13.35□□□□□ -0.27
ERBB2-221ENST00000584888 SULT1A4P0DMN0 295 aa13.35□□□□□ -0.27
ERBB2-221ENST00000584888 RELQ04864 619 aaPredicted RBP13.35□□□□□ -0.27
ERBB2-221ENST00000584888 GUCA2BQ16661 112 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms