RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 C8orf59Q8N0T1 100 aaPredicted RBP10.02□□□□□ -0.81
CSNK1D-224ENST00000584672 DHRSXQ8N5I4 330 aa10.02□□□□□ -0.81
CSNK1D-224ENST00000584672 GRAMD2BQ96HH9 432 aa10.02□□□□□ -0.81
CSNK1D-224ENST00000584672 FAM210BQ96KR6 192 aa10.02□□□□□ -0.81
CSNK1D-224ENST00000584672 ATG101Q9BSB4 218 aa10.02□□□□□ -0.81
CSNK1D-224ENST00000584672 RNF167Q9H6Y7 350 aa10.02□□□□□ -0.81
CSNK1D-224ENST00000584672 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
CSNK1D-224ENST00000584672 PLCXD1Q9NUJ7 323 aa10.02□□□□□ -0.81
CSNK1D-224ENST00000584672 A0A1B0GU03 582 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 SSX5O60225 188 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 ARPC4P59998 168 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 KRTAP10-2P60368 255 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 FABP5Q01469 135 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 TMEM17Q86X19 198 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 OR1P1Q8NH06 330 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 MOB3AQ96BX8 217 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 RAB40CQ96S21 281 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 TMEM231Q9H6L2 316 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 PLEKHA2Q9HB19 425 aa10.01□□□□□ -0.81
CSNK1D-224ENST00000584672 SMIM30A4D0T7 59 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 DBX1A6NMT0 343 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 MARCH11A6NNE9 402 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 KRASP01116 189 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 PPYP01298 95 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 P2RY1P47900 373 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 PPP5CP53041 499 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 FXYD7P58549 80 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 GNG2P59768 71 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 ZNF818PQ6ZRF7 136 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 DCANP1Q8TF63 244 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 TMEM56Q96MV1 263 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 TXN2Q99757 166 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 NIPSNAP3BQ9BS92 247 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 COMMD9Q9P000 198 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 DKK2Q9UBU2 259 aa10□□□□□ -0.81
CSNK1D-224ENST00000584672 IFITM5A6NNB3 132 aa9.99□□□□□ -0.81
CSNK1D-224ENST00000584672 SNAPC5O75971 98 aa9.99□□□□□ -0.81
CSNK1D-224ENST00000584672 G6PCP35575 357 aa9.99□□□□□ -0.81
CSNK1D-224ENST00000584672 RANBP1P43487 201 aa9.99□□□□□ -0.81
CSNK1D-224ENST00000584672 DHRS2Q13268 280 aa9.99□□□□□ -0.81
CSNK1D-224ENST00000584672 ZNF600Q6ZNG1 722 aa9.99□□□□□ -0.81
CSNK1D-224ENST00000584672 C1QTNF4Q9BXJ3 329 aa9.99□□□□□ -0.81
CSNK1D-224ENST00000584672 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
CSNK1D-224ENST00000584672 ERICH4A6NGS2 130 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 RLN1P04808 185 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 FGF2P09038 288 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 NPPCP23582 126 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 LPAR6P43657 344 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 ARL6IP1Q15041 203 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 ZBTB34Q8NCN2 500 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 MYCBP2O75592 4640 aa9.98□□□□□ -0.81
CSNK1D-224ENST00000584672 A0A1W2PS18 150 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 HELTA6NFD8 242 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 PDCD5O14737 125 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 FGF9P31371 208 aaPredicted RBP9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 NUTF2P61970 127 aaKnown RBP9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 TRAM1Q15629 374 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 MSMO1Q15800 293 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 ZNF705AQ6ZN79 300 aaPredicted RBP9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 TPRA1Q86W33 373 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 BEST4Q8NFU0 473 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 ZNRF2Q8NHG8 242 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 FCAMRQ8WWV6 532 aa9.97□□□□□ -0.81
CSNK1D-224ENST00000584672 TMEM189A5PLL7 270 aa9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 ZNF705FA8MVS1 300 aaPredicted RBP9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 ZNF705DP0CH99 300 aaPredicted RBP9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 ZNF705BP0CI00 300 aaPredicted RBP9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 PSMA1P25786 263 aaKnown RBP9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 DEFB1P60022 68 aa9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 SPINK9Q5DT21 86 aa9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 METTL26Q96S19 204 aa9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 PRNDQ9UKY0 176 aa9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 RFNGQ9Y644 331 aa9.96□□□□□ -0.82
CSNK1D-224ENST00000584672 FAT1Q14517 4588 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 SRRM2Q9UQ35 2752 aaKnown RBP9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 NPBWR1P48145 328 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 FAM3BP58499 235 aaPredicted RBP9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 DAD1P61803 113 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 DLK1P80370 383 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 Q5VSD8 79 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 C10orf67Q8IYJ2 551 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 TSPAN14Q8NG11 270 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 NEU1Q99519 415 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 CCDC90BQ9GZT6 254 aa9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 YTHDF2Q9Y5A9 579 aaKnown RBP9.95□□□□□ -0.82
CSNK1D-224ENST00000584672 RPS10-NUDT3A0A1W2PQS6 291 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 H3BMM0 161 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 CASQ2O14958 399 aaPredicted RBP9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 TMEM50AO95807 157 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 NUDT3O95989 172 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 RAB3BP20337 219 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 MYL9P24844 172 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 F2RP25116 425 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 FUSP35637 526 aaKnown RBP eCLIP9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 GDF5OSQ5U4N7 250 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 C15orf53Q8NAA6 179 aa9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 NARS2Q96I59 477 aaKnown RBP9.94□□□□□ -0.82
CSNK1D-224ENST00000584672 C18orf15Q96N68 181 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms