RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 EXTL2Q9UBQ6 330 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 K7EMT4 169 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 TSPAN4O14817 238 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 NUPL2O15504 423 aaKnown RBP8.29□□□□□ -1.08
CCDC47-206ENST00000584112 IGKV1-39P01597 117 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 IGKV1D-39P04432 117 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 SMIM18P0DKX4 95 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 FCGR2BP31994 310 aaPredicted RBP8.29□□□□□ -1.08
CCDC47-206ENST00000584112 ADMP35318 185 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 AKR1C2P52895 323 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 MFAP4P55083 255 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 PIGPP57054 158 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 HSPE1P61604 102 aaKnown RBP8.29□□□□□ -1.08
CCDC47-206ENST00000584112 ERHP84090 104 aaKnown RBP8.29□□□□□ -1.08
CCDC47-206ENST00000584112 GPR107Q5VW38 600 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 LHFPL1Q86WI0 220 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 CCDC71LQ8N9Z2 235 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 OR52I2Q8NH67 350 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 ZFAND1Q8TCF1 268 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 MISP3Q96FF7 219 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 CHRDL1Q9BU40 450 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 MRPS26Q9BYN8 205 aaKnown RBP8.29□□□□□ -1.08
CCDC47-206ENST00000584112 NAA50Q9GZZ1 169 aaKnown RBP8.29□□□□□ -1.08
CCDC47-206ENST00000584112 KLK11Q9UBX7 282 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 MTFP1Q9UDX5 166 aa8.29□□□□□ -1.08
CCDC47-206ENST00000584112 OR4C46A6NHA9 309 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 C15orf62A8K5M9 175 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
CCDC47-206ENST00000584112 CD3DP04234 171 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 CTSGP08311 255 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 TAS2R19P59542 299 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 MRPS10P82664 201 aaKnown RBP8.28□□□□□ -1.08
CCDC47-206ENST00000584112 PRR20EP86478 221 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 PRR20CP86479 221 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 PRR20DP86480 221 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 PRR20BP86481 221 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 PRR20AP86496 221 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 SSBP1Q04837 148 aaKnown RBP8.28□□□□□ -1.08
CCDC47-206ENST00000584112 GPR141Q7Z602 305 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 Q8N1X5 172 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 TMEM229BQ8NBD8 167 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 PDCD10Q9BUL8 212 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 COPZ2Q9P299 210 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 HMCN2Q8NDA2 5059 aa8.28□□□□□ -1.08
CCDC47-206ENST00000584112 C3orf85A0A1B0GTC6 90 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 GABARAPH6UMI1 98 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 I3L2K1 104 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 RGS5O15539 181 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 GNG7O60262 68 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 B3GALNT1O75752 331 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 MT-CO2P00403 227 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 CD74P04233 296 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 SNCAP37840 140 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 PPP5CP53041 499 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 APOC4P55056 127 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 PMS2P11Q13670 270 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 SLC35G3Q8N808 338 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 TERB2Q8NHR7 220 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 TP53RKQ96S44 253 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 ABHD1Q96SE0 405 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 NXF2Q9GZY0 626 aaKnown RBP8.27□□□□□ -1.09
CCDC47-206ENST00000584112 SCRT2Q9NQ03 307 aa8.27□□□□□ -1.09
CCDC47-206ENST00000584112 FLG2Q5D862 2391 aaPredicted RBP8.27□□□□□ -1.09
CCDC47-206ENST00000584112 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 INS-IGF2F8WCM5 200 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 CORTO00230 105 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 UBE2CO00762 179 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 ZNF207O43670 478 aaKnown RBP8.26□□□□□ -1.09
CCDC47-206ENST00000584112 YIF1AO95070 293 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 RAB3DO95716 219 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 IFNA17P01571 189 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 IGKV1-5P01602 117 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 PI3P19957 117 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 BMI1P35226 326 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 SUB1P53999 127 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC47-206ENST00000584112 MEF2DQ14814 521 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 TRIM16LQ309B1 348 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 SCGB2B2Q4G0G5 96 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 STEAP1BQ6NZ63 245 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 RNASE11Q8TAA1 199 aaKnown RBP8.26□□□□□ -1.09
CCDC47-206ENST00000584112 PINX1Q96BK5 328 aaKnown RBP8.26□□□□□ -1.09
CCDC47-206ENST00000584112 RRNAD1Q96FB5 475 aaKnown RBP8.26□□□□□ -1.09
CCDC47-206ENST00000584112 OR10C1Q96KK4 312 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 GINS3Q9BRX5 216 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 RABL2AQ9UBK7 228 aaPredicted RBP8.26□□□□□ -1.09
CCDC47-206ENST00000584112 SMPXQ9UHP9 88 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 RABL2BQ9UNT1 228 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 TP53TG1Q9Y2A0 90 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 AGRNO00468 2067 aa8.26□□□□□ -1.09
CCDC47-206ENST00000584112 IGHV3OR16-8A0A075B7F1 116 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 IGHV7-4-1A0A0J9YVY3 117 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 CD5P06127 495 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 CTSDP07339 412 aaPredicted RBP8.25□□□□□ -1.09
CCDC47-206ENST00000584112 P0C879 139 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 RBMY1CP0DJD4 496 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 UCP1P25874 307 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 NPBWR1P48145 328 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 ALDH3B2P48448 385 aa8.25□□□□□ -1.09
CCDC47-206ENST00000584112 CMC4P56277 68 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms