RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 TREML4Q6UXN2 200 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 AKAP14Q86UN6 197 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 NDUFA11Q86Y39 141 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 MRPL41Q8IXM3 137 aaKnown RBP6.51□□□□□ -1.37
ERBB2-216ENST00000584014 DUSP18Q8NEJ0 188 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 OR5B3Q8NH48 314 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 ZNF431Q8TF32 576 aaPredicted RBP6.51□□□□□ -1.37
ERBB2-216ENST00000584014 PINX1Q96BK5 328 aaKnown RBP6.51□□□□□ -1.37
ERBB2-216ENST00000584014 MISP3Q96FF7 219 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 TMEM68Q96MH6 324 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 MAGT1Q9H0U3 335 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 ALX4Q9H161 411 aaPredicted RBP6.51□□□□□ -1.37
ERBB2-216ENST00000584014 GNB4Q9HAV0 340 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 FBXL7Q9UJT9 491 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 ZNF257Q9Y2Q1 563 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 TMED3Q9Y3Q3 217 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 TNCP24821 2201 aa6.51□□□□□ -1.37
ERBB2-216ENST00000584014 A0A1B0GU03 582 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 IGLC7A0M8Q6 106 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 MPTX1A8MV57 137 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 TSPAN4O14817 238 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 CYB5BO43169 146 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 NDUFB8O95169 186 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 IGLV1-40P01703 118 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 IGHV3-48P01763 117 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 P0C879 139 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 IAPPP10997 89 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 PSMB8P28062 276 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 CRIP2P52943 208 aaPredicted RBP6.5□□□□□ -1.37
ERBB2-216ENST00000584014 SPCS3P61009 180 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 PRCDQ00LT1 54 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 WT1-ASQ06250 92 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 USF2Q15853 346 aaPredicted RBP6.5□□□□□ -1.37
ERBB2-216ENST00000584014 IAH1Q2TAA2 248 aaPredicted RBP6.5□□□□□ -1.37
ERBB2-216ENST00000584014 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 NMSQ5H8A3 153 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 SAPCD1Q5SSQ6 148 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 C11orf87Q6NUJ2 197 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 TTC9CQ8N5M4 171 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 ZNF491Q8N8L2 437 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 WIPF2Q8TF74 440 aaPredicted RBP6.5□□□□□ -1.37
ERBB2-216ENST00000584014 GLMPQ8WWB7 406 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 RCC1LQ96I51 464 aaKnown RBP6.5□□□□□ -1.37
ERBB2-216ENST00000584014 HIPK2Q9H2X6 1198 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 RBKSQ9H477 322 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 SLA2Q9H6Q3 261 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 ZC4H2Q9NQZ6 224 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 NDUFA4L2Q9NRX3 87 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 ZFP57Q9NU63 452 aa6.5□□□□□ -1.37
ERBB2-216ENST00000584014 A0A0G2JLM5 398 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 DUXBA0A1W2PPF3 345 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 NPIPB5A8MRT5 1133 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 GOSR2O14653 212 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 SIX6O95475 246 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 PTTG1O95997 202 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 IFNA10P01566 189 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 IL5P05113 134 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 CTRB1P17538 263 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 CDKN1BP46527 198 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 CDX1P47902 265 aaPredicted RBP6.49□□□□□ -1.37
ERBB2-216ENST00000584014 SMCPP49901 116 aaPredicted RBP6.49□□□□□ -1.37
ERBB2-216ENST00000584014 SUB1P53999 127 aaKnown RBP eCLIP6.49□□□□□ -1.37
ERBB2-216ENST00000584014 RPP30P78346 268 aaKnown RBP6.49□□□□□ -1.37
ERBB2-216ENST00000584014 EXOSC2Q13868 293 aaKnown RBP6.49□□□□□ -1.37
ERBB2-216ENST00000584014 C15orf32Q32M92 178 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 CTRB2Q6GPI1 263 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 GSG1LQ6UXU4 331 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 HSD17B13Q7Z5P4 300 aaPredicted RBP6.49□□□□□ -1.37
ERBB2-216ENST00000584014 ZNF429Q86V71 674 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 LRTM2Q8N967 370 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 UBAC2Q8NBM4 344 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 OR4F17Q8NGA8 305 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 MITD1Q8WV92 249 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 OR4F4Q96R69 305 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 GPR61Q9BZJ8 451 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 PALMDQ9NP74 551 aa6.49□□□□□ -1.37
ERBB2-216ENST00000584014 ADARB2-AS1A8MUL3 147 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 H3BUA1 57 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 CCL24O00175 119 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 SSSCA1O60232 199 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 PRAF2O60831 178 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 HIST1H1BP16401 226 aaKnown RBP6.48□□□□□ -1.37
ERBB2-216ENST00000584014 NKX2-1P43699 371 aaPredicted RBP6.48□□□□□ -1.37
ERBB2-216ENST00000584014 TNFRSF9Q07011 255 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 TATDN3Q17R31 274 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 Q56UQ5 140 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 CLEC19AQ6UXS0 136 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 CADM3Q8N126 398 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 NECAP1Q8NC96 275 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 OR11H1Q8NG94 326 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 OR1N2Q8NGR9 330 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 DTD1Q8TEA8 209 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 C4orf3Q8WVX3 66 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 RAX2Q96IS3 184 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 OR10C1Q96KK4 312 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 UBE2E2Q96LR5 201 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 P2RX4Q99571 388 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 SRSF8Q9BRL6 282 aaKnown RBP6.48□□□□□ -1.37
ERBB2-216ENST00000584014 MARVELD1Q9BSK0 173 aa6.48□□□□□ -1.37
ERBB2-216ENST00000584014 THYN1Q9P016 225 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms