RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CTRB1P17538 263 aa11.91□□□□□ -0.5
SKA2-209ENST00000583976 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
SKA2-209ENST00000583976 CTRB2Q6GPI1 263 aa11.91□□□□□ -0.5
SKA2-209ENST00000583976 THOC7Q6I9Y2 204 aaKnown RBP11.91□□□□□ -0.5
SKA2-209ENST00000583976 NRARPQ7Z6K4 114 aa11.91□□□□□ -0.5
SKA2-209ENST00000583976 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.91□□□□□ -0.5
SKA2-209ENST00000583976 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
SKA2-209ENST00000583976 C13orf42A0A1B0GVH6 325 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 CRYGCP07315 174 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 SYNJ2BPP57105 145 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 RHOGP84095 191 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 PRCDQ00LT1 54 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 NMSQ5H8A3 153 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 IL34Q6ZMJ4 242 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 LRTM2Q8N967 370 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 SRSF8Q9BRL6 282 aaKnown RBP11.9□□□□□ -0.5
SKA2-209ENST00000583976 SEC22CQ9BRL7 303 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 ELOVL1Q9BW60 279 aa11.9□□□□□ -0.5
SKA2-209ENST00000583976 IZUMO1RA6ND01 250 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 ADAP1O75689 374 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 DHFRP00374 187 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 SULT1A3P0DMM9 295 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 SULT1A4P0DMN0 295 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 OR9G4Q8NGQ1 327 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 COQ8AQ8NI60 647 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 PLEKHA3Q9HB20 300 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 FBXL7Q9UJT9 491 aa11.89□□□□□ -0.51
SKA2-209ENST00000583976 TRBV9A0A0B4J1U6 114 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 PIGBOS1A0A0B4J2F0 54 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 A0A0G2JLM5 398 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 A8MZ25 164 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 NDUFB8O95169 186 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 ZP3P21754 424 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 HOXA1P49639 335 aaPredicted RBP11.88□□□□□ -0.51
SKA2-209ENST00000583976 ATP5G2Q06055 141 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 HAGHQ16775 308 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 GGNBP1Q5YKI7 109 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 SLC25A24Q6NUK1 477 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 PLET1Q6UQ28 207 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 HSD17B13Q7Z5P4 300 aaPredicted RBP11.88□□□□□ -0.51
SKA2-209ENST00000583976 UXS1Q8NBZ7 420 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 DUSP18Q8NEJ0 188 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 OR1S1Q8NH92 325 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 FANCD2OSQ96PS1 177 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 SPATA25Q9BR10 227 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 RANGRFQ9HD47 186 aaPredicted RBP11.88□□□□□ -0.51
SKA2-209ENST00000583976 S4R3C0 116 aa11.88□□□□□ -0.51
SKA2-209ENST00000583976 BRI3O95415 125 aa11.87□□□□□ -0.51
SKA2-209ENST00000583976 IGHV3-23P01764 117 aa11.87□□□□□ -0.51
SKA2-209ENST00000583976 ERHP84090 104 aaKnown RBP11.87□□□□□ -0.51
SKA2-209ENST00000583976 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
SKA2-209ENST00000583976 C15orf32Q32M92 178 aa11.87□□□□□ -0.51
SKA2-209ENST00000583976 NECAP1Q8NC96 275 aa11.87□□□□□ -0.51
SKA2-209ENST00000583976 USMG5Q96IX5 58 aa11.87□□□□□ -0.51
SKA2-209ENST00000583976 ENY2Q9NPA8 101 aa11.87□□□□□ -0.51
SKA2-209ENST00000583976 TMED3Q9Y3Q3 217 aa11.87□□□□□ -0.51
SKA2-209ENST00000583976 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
SKA2-209ENST00000583976 F11RQ9Y624 299 aaKnown RBP11.87□□□□□ -0.51
SKA2-209ENST00000583976 IGLV11-55A0A075B6I3 123 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 A0A1B0GU03 582 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 FAM223BA6NKX1 122 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 CEBPZOSA8MTT3 80 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 MPTX1A8MV57 137 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 INMT-MINDY4F8WBC2 141 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 HIST1H1BP16401 226 aaKnown RBP11.86□□□□□ -0.51
SKA2-209ENST00000583976 MFAP2P55001 183 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 SPCS3P61009 180 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 FAM223AQ8IWN6 122 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 OR2C3Q8N628 320 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 OR52E5Q8NH55 327 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 ZNF431Q8TF32 576 aaPredicted RBP11.86□□□□□ -0.51
SKA2-209ENST00000583976 MITD1Q8WV92 249 aa11.86□□□□□ -0.51
SKA2-209ENST00000583976 IGHV3-21A0A0B4J1V1 117 aa11.85□□□□□ -0.51
SKA2-209ENST00000583976 CYB5BO43169 146 aa11.85□□□□□ -0.51
SKA2-209ENST00000583976 IFNA21P01568 189 aa11.85□□□□□ -0.51
SKA2-209ENST00000583976 CSN3P07498 182 aa11.85□□□□□ -0.51
SKA2-209ENST00000583976 EDN2P20800 178 aa11.85□□□□□ -0.51
SKA2-209ENST00000583976 SNCAP37840 140 aa11.85□□□□□ -0.51
SKA2-209ENST00000583976 EXOSC2Q13868 293 aaKnown RBP11.85□□□□□ -0.51
SKA2-209ENST00000583976 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
SKA2-209ENST00000583976 WFDC10AQ9H1F0 79 aa11.85□□□□□ -0.51
SKA2-209ENST00000583976 MFSD2BA6NFX1 497 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 CCSO14618 274 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 IL5P05113 134 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 TNFRSF9Q07011 255 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 ZNF343Q6P1L6 599 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 C12orf45Q8N5I9 185 aaPredicted RBP11.84□□□□□ -0.51
SKA2-209ENST00000583976 OR1P1Q8NH06 330 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 RBKSQ9H477 322 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 HEYLQ9NQ87 328 aaPredicted RBP11.84□□□□□ -0.51
SKA2-209ENST00000583976 THYN1Q9P016 225 aa11.84□□□□□ -0.51
SKA2-209ENST00000583976 PEF1Q9UBV8 284 aaKnown RBP11.84□□□□□ -0.51
SKA2-209ENST00000583976 PITX3O75364 302 aa11.83□□□□□ -0.52
SKA2-209ENST00000583976 SLC25A6P12236 298 aa11.83□□□□□ -0.52
SKA2-209ENST00000583976 RPEL1Q2QD12 228 aa11.83□□□□□ -0.52
SKA2-209ENST00000583976 LCN12Q6JVE5 192 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms