RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZNF664Q8N3J9 261 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 SLC25A45Q8N413 288 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 CD177Q8N6Q3 437 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF525Q8N782 197 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR4F17Q8NGA8 305 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR10G3Q8NGC4 313 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR5A2Q8NGI9 324 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR1L4Q8NGR5 311 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR1P1Q8NH06 330 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR4F5Q8NH21 305 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 SCGB1C1Q8TD33 95 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 LHX4Q969G2 390 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 SDSLQ96GA7 329 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 IMMP1LQ96LU5 166 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 PACRGQ96M98 296 aaPredicted RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 LINC00167Q96N53 147 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR4F4Q96R69 305 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 DEFB126Q9BYW3 111 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 MRPL37Q9BZE1 423 aaKnown RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 ULBP2Q9BZM5 246 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 LINC00470Q9BZP3 86 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR2H1Q9GZK4 316 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 WDR61Q9GZS3 305 aaKnown RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF442Q9H7R0 627 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 UBE2ZQ9H832 354 aaPredicted RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 WDR54Q9H977 334 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 NRN1Q9NPD7 142 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM38BQ9NVV0 291 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF581Q9P0T4 197 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 MUC6Q6W4X9 2439 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1D-13A0A0B4J2D9 117 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1-6A0A0C4DH72 117 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 PPP5D1E7EU14 171 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 M0QZK8 103 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 TNFSF11O14788 317 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 NBR2O15453 112 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 SSSCA1O60232 199 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 SS18L1O75177 396 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF737O75373 536 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 KBTBD11O94819 623 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 NXPH4O95158 308 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1-39P01597 117 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1D-39P04432 117 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 METTL15P1P0C7V9 234 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1-13P0DP09 117 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 ESDP10768 282 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF32P17041 273 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 GZMHP20718 246 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 OMGP23515 440 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 BMI1P35226 326 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 YPEL3P61236 119 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 NUTF2P61970 127 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 RAB11AP62491 216 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 RPL23P62829 140 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 HBG1P69891 147 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 HBG2P69892 147 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 LCN2P80188 198 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 RUNX1Q01196 453 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 SLC10A1Q14973 349 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 HERPUD1Q15011 391 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 MSMO1Q15800 293 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 BSXQ3C1V8 233 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 ACOT6Q3I5F7 207 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 SPIN3Q5JUX0 258 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 C1orf194Q5T5A4 169 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 REG3GQ6UW15 175 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 SHISA6Q6ZSJ9 500 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 RPS19BP1Q86WX3 136 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 CALHM1Q8IU99 346 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 RPP25LQ8N5L8 163 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 TCTEX1D1Q8N7M0 179 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 OR2AE1Q8NHA4 323 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 MRPL30Q8TCC3 161 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 JSRP1Q96MG2 331 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 OR4C12Q96R67 309 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 TXNDC17Q9BRA2 123 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 MANBALQ9NQG1 85 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 CCL28Q9NRJ3 127 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 SLC39A9Q9NUM3 307 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 PSENENQ9NZ42 101 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 MTCH1Q9NZJ7 389 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 GNG13Q9P2W3 67 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF256Q9Y2P7 627 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 KIF25-AS1Q9Y6Z4 181 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 URGCP-MRPS24S4R325 110 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 PCDH15Q96QU1 1955 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 ATRXP46100 2492 aa2.99□□□□□ -1.93
SMCHD1-208ENST00000583344 SPTBP11277 2137 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 TRAV9-1A0A075B6T8 112 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PPIAL4EA0A075B759 164 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 IGHV1-45A0A0A0MS14 117 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 A0A0G2JRQ6 117 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 CTXND1A0A1B0GTU2 59 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 A0A1B0GV50 99 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM210A6NLX4 147 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 CD300LBA8K4G0 201 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 CEBPZOSA8MTT3 80 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 TRAPPC2LH3BP13 241 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 TCAPO15273 167 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 SCRG1O75711 98 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms