RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 C20orf204Q6ZNR8 217 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 Q6ZRM9 215 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 HIST3H2BBQ8N257 126 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 SLC25A33Q9BSK2 321 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 DCTN5Q9BTE1 182 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 CACNA1EQ15878 2313 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 TRAV20A0A0B4J274 112 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 IGKV1-39P01597 117 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 IGKV1D-39P04432 117 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 COL5A1-AS1Q5SY13 56 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 RNASEKQ6P5S7 137 aaKnown RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 PPP1R27Q86WC6 154 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 EEF1AKMT3Q96AZ1 226 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 DPH3P1Q9H4G8 78 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 RPP21Q9H633 154 aaKnown RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 COL5A1P20908 1838 aaPredicted RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 TMEM189A5PLL7 270 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 DIRC3C9JPN6 131 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 PPBPP02775 128 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 REG1AP05451 166 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 PFN1P07737 140 aaKnown RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 IGHV1-8P0DP01 117 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 Q0VG73 95 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 LYRM7Q5U5X0 104 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 C12orf54Q6X4T0 127 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 TSKUQ8WUA8 353 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 SPTBP11277 2137 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 COL4A2P08572 1712 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 A0A1B0GWJ7 208 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 J3QR89 54 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 MMP23AO75900 390 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 LHBP01229 141 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 IGHV2-5P01817 119 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 YPEL3P61236 119 aaPredicted RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 SMAGPQ0VAQ4 97 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 IZUMO4Q1ZYL8 232 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 RBPMS2Q6ZRY4 209 aaKnown RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 WDR86Q86TI4 376 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 OR2D3Q8NGH3 330 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 SDK1Q7Z5N4 2213 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 ARID1BQ8NFD5 2236 aaPredicted RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 A0A0G2JRQ6 117 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 TMEM50AO95807 157 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 TMEM11P17152 192 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 LINC00305Q7Z4B0 112 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 METTL26Q96S19 204 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 GSN-AS1Q9NRJ2 163 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 EPDR1Q9UM22 224 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 LINC00473A8K010 186 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 TCF24Q7RTU0 167 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 BLNKQ8WV28 456 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 KCNS1Q96KK3 526 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 ATP6V0BQ99437 205 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 MGST2Q99735 147 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 SSBP3Q9BWW4 388 aaPredicted RBP4.81□□□□□ -1.64
RTTN-209ENST00000583043 TMEM14CQ9P0S9 112 aa4.81□□□□□ -1.64
RTTN-209ENST00000583043 A0A1W2PPE3 182 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 RPLP1P05386 114 aaKnown RBP4.8□□□□□ -1.64
RTTN-209ENST00000583043 LURAP1LQ8IV03 231 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 PIMREGQ9BSJ6 248 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 NDUFAF3Q9BU61 184 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 GNB4Q9HAV0 340 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 RNASE2P10153 161 aaKnown RBP4.8□□□□□ -1.64
RTTN-209ENST00000583043 ARL3P36405 182 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 FXYD3Q14802 87 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 Q6ZR03 302 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 TBX15Q96SF7 602 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 TMEM70Q9BUB7 260 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 MSRB2Q9Y3D2 182 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 TMEM8BA6NDV4 472 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 SIAH2O43255 324 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 P0C879 139 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 DLX6P56179 175 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 C11orf53Q8IXP5 236 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 ZCCHC24Q8N2G6 241 aaKnown RBP4.8□□□□□ -1.64
RTTN-209ENST00000583043 THAP8Q8NA92 274 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 ZNF114Q8NC26 417 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 GPHA2Q96T91 129 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 NDUFA4L2Q9NRX3 87 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 HIF1ANQ9NWT6 349 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 ATP5G3P48201 142 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 ADIPOQQ15848 244 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 SRSF12Q8WXF0 261 aaKnown RBP4.8□□□□□ -1.64
RTTN-209ENST00000583043 FAM103A1Q9BTL3 118 aaKnown RBP4.8□□□□□ -1.64
RTTN-209ENST00000583043 DKK4Q9UBT3 224 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 CBY1Q9Y3M2 126 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 F11RQ9Y624 299 aaKnown RBP4.8□□□□□ -1.64
RTTN-209ENST00000583043 ASCC3Q8N3C0 2202 aaKnown RBP4.8□□□□□ -1.64
RTTN-209ENST00000583043 A6NDN8 102 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 RRHO14718 337 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 EGR1P18146 543 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 MRPL54Q6P161 138 aaKnown RBP4.8□□□□□ -1.64
RTTN-209ENST00000583043 ZNF600Q6ZNG1 722 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 MIR17HGQ75NE6 70 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 C21orf62Q9NYP8 219 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 LAMTOR2Q9Y2Q5 125 aa4.8□□□□□ -1.64
RTTN-209ENST00000583043 SNRNP200O75643 2136 aaKnown RBP4.79□□□□□ -1.64
RTTN-209ENST00000583043 A0A0G2JLM5 398 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 SCO2A0A1W2PP80 73 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms