RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 WT1-ASQ06250 92 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 TNXAQ16473 311 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 SIRT7Q9NRC8 400 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 A0A1W2PPI3 338 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 E7EUB6 86 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 PAGE4O60829 102 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 C10orf55Q5SWW7 151 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 ETFRF1Q6IPR1 90 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 OR4F5Q8NH21 305 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 RITA1Q96K30 269 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 OR4F4Q96R69 305 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 TPSG1Q9NRR2 321 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 METTL1Q9UBP6 276 aaKnown RBP18.2■□□□□ 0.5
CCDC47-204ENST00000582252 TSPAN9O75954 239 aa18.19■□□□□ 0.5
CCDC47-204ENST00000582252 PRB3Q04118 309 aaPredicted RBP18.19■□□□□ 0.5
CCDC47-204ENST00000582252 PPP1R27Q86WC6 154 aa18.19■□□□□ 0.5
CCDC47-204ENST00000582252 ZNF114Q8NC26 417 aa18.19■□□□□ 0.5
CCDC47-204ENST00000582252 NAT8Q9UHE5 227 aa18.19■□□□□ 0.5
CCDC47-204ENST00000582252 PRELID1Q9Y255 219 aa18.19■□□□□ 0.5
CCDC47-204ENST00000582252 TNCP24821 2201 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 ODF3BA8MYP8 253 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 PDE6DO43924 150 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 OR2C1O95371 312 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 IGHV2-5P01817 119 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 DEFA4P12838 97 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 FOLR2P14207 255 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 MRGPRG-AS1Q2M3A8 158 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 RNF212Q495C1 297 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 SPNS3Q6ZMD2 512 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 SMIM7Q9BQ49 75 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 CXorf65A6NEN9 183 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 C11orf94C9JXX5 98 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 ARL14EPLP0DKL9 152 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 OR10J1P30954 320 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 COMPP49747 757 aaPredicted RBP18.18■□□□□ 0.5
CCDC47-204ENST00000582252 ABHD5Q8WTS1 349 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 SDF2L1Q9HCN8 221 aa18.18■□□□□ 0.5
CCDC47-204ENST00000582252 OOSP1A8MZH6 123 aa18.17■□□□□ 0.5
CCDC47-204ENST00000582252 F6UZH7 168 aa18.17■□□□□ 0.5
CCDC47-204ENST00000582252 CORTO00230 105 aa18.17■□□□□ 0.5
CCDC47-204ENST00000582252 LINC00869P0C866 280 aa18.17■□□□□ 0.5
CCDC47-204ENST00000582252 CCDC144NLQ6NUI1 221 aa18.17■□□□□ 0.5
CCDC47-204ENST00000582252 CYP2G1PQ6ZSU1 146 aa18.17■□□□□ 0.5
CCDC47-204ENST00000582252 HIST1H2BAQ96A08 127 aa18.17■□□□□ 0.5
CCDC47-204ENST00000582252 POLQO75417 2590 aa18.17■□□□□ 0.5
CCDC47-204ENST00000582252 TIMM23O14925 209 aa18.16■□□□□ 0.5
CCDC47-204ENST00000582252 IGHV4-39P01824 125 aa18.16■□□□□ 0.5
CCDC47-204ENST00000582252 PLGLAQ15195 96 aa18.16■□□□□ 0.5
CCDC47-204ENST00000582252 GATAD1Q8WUU5 269 aa18.16■□□□□ 0.5
CCDC47-204ENST00000582252 RNF2Q99496 336 aa18.16■□□□□ 0.5
CCDC47-204ENST00000582252 SRSF8Q9BRL6 282 aaKnown RBP18.16■□□□□ 0.5
CCDC47-204ENST00000582252 FBN2P35556 2912 aa18.16■□□□□ 0.5
CCDC47-204ENST00000582252 IGLC7A0M8Q6 106 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 VENTXO95231 258 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 CNTFRP26992 372 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 TMEM241Q24JQ0 296 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 C22orf15Q8WYQ4 148 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 ACY3Q96HD9 319 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 FUT9Q9Y231 359 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 CLN5O75503 358 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 CRYBA1P05813 215 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 MINOS1Q5TGZ0 78 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 VMO1Q7Z5L0 202 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 ISOC2Q96AB3 205 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 PARLQ9H300 379 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 MINOS1-NBL1R4GNA1 71 aa18.15■□□□□ 0.5
CCDC47-204ENST00000582252 NBPF19A0A087WUL8 3843 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 NAV2Q8IVL1 2488 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 IGKV1OR2-108A0A075B7D4 117 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 PAX1P15863 534 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 GCHFRP30047 84 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 PDLIM4P50479 330 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 TAS2R45P59539 299 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 GNB1P62873 340 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 KLRD1Q13241 179 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 HABP2Q14520 560 aaPredicted RBP18.14■□□□□ 0.49
CCDC47-204ENST00000582252 ZNF674Q2M3X9 581 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 FAM78BQ5VT40 261 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 CST9LP1Q5W188 147 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 PVRIGQ6DKI7 326 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 RPUSD4Q96CM3 377 aaKnown RBP18.14■□□□□ 0.49
CCDC47-204ENST00000582252 TMEM242Q9NWH2 141 aa18.14■□□□□ 0.49
CCDC47-204ENST00000582252 MOSP00540 346 aa18.13■□□□□ 0.49
CCDC47-204ENST00000582252 ATP5J2P56134 94 aa18.13■□□□□ 0.49
CCDC47-204ENST00000582252 SELENOTP62341 195 aa18.13■□□□□ 0.49
CCDC47-204ENST00000582252 HCP5Q6MZN7 132 aa18.13■□□□□ 0.49
CCDC47-204ENST00000582252 MRPL32Q9BYC8 188 aaKnown RBP18.13■□□□□ 0.49
CCDC47-204ENST00000582252 CTDSP1Q9GZU7 261 aa18.13■□□□□ 0.49
CCDC47-204ENST00000582252 FBXL15Q9H469 300 aa18.13■□□□□ 0.49
CCDC47-204ENST00000582252 SEPSECSQ9HD40 501 aaKnown RBP18.13■□□□□ 0.49
CCDC47-204ENST00000582252 TECRQ9NZ01 308 aaKnown RBP18.13■□□□□ 0.49
CCDC47-204ENST00000582252 HILPDAQ9Y5L2 63 aa18.13■□□□□ 0.49
CCDC47-204ENST00000582252 ARL2-SNX15V9GYD0 113 aa18.13■□□□□ 0.49
CCDC47-204ENST00000582252 LGALS4P56470 323 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 UBE2G2P60604 165 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 RAB5BP61020 215 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 MMDQ15546 238 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 MLANAQ16655 118 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 FAM24BQ8N5W8 94 aa18.12■□□□□ 0.49
CCDC47-204ENST00000582252 THAP8Q8NA92 274 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms