RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 OR1P1Q8NH06 330 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 MISP3Q96FF7 219 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 TMEM56Q96MV1 263 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 CCDC90BQ9GZT6 254 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 SCN3BQ9NY72 215 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 COMMD9Q9P000 198 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 NSG2Q9Y328 171 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 HERC1Q15751 4861 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 MARCH11A6NNE9 402 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 GNG7O60262 68 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 SNAPC5O75971 98 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 IGHV3-48P01763 117 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 PTHLHP12272 177 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 RAB3BP20337 219 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 RCN1Q15293 331 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 ACTL10Q5JWF8 245 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 LCE2CQ5TA81 110 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 AADACL3Q5VUY0 350 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 TMEM231Q9H6L2 316 aa9.12□□□□□ -0.95
SS18-219ENST00000581570 K7EQG2 157 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 CASQ2O14958 399 aaPredicted RBP9.11□□□□□ -0.95
SS18-219ENST00000581570 MT-CO2P00403 227 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 MYL9P24844 172 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 FXYD4P59646 89 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 TNP2Q05952 138 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 RNF212Q495C1 297 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 ZNF818PQ6ZRF7 136 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 STXBP6Q8NFX7 210 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 GRAMD2BQ96HH9 432 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 FAM210BQ96KR6 192 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 FKBP11Q9NYL4 201 aa9.11□□□□□ -0.95
SS18-219ENST00000581570 A6NJY4 79 aa9.1□□□□□ -0.95
SS18-219ENST00000581570 KRASP01116 189 aa9.1□□□□□ -0.95
SS18-219ENST00000581570 TPRA1Q86W33 373 aa9.1□□□□□ -0.95
SS18-219ENST00000581570 BEST4Q8NFU0 473 aa9.1□□□□□ -0.95
SS18-219ENST00000581570 MGLLQ99685 303 aa9.1□□□□□ -0.95
SS18-219ENST00000581570 PRNDQ9UKY0 176 aa9.1□□□□□ -0.95
SS18-219ENST00000581570 PUS1Q9Y606 427 aaKnown RBP eCLIP9.1□□□□□ -0.95
SS18-219ENST00000581570 A0A1W2PS18 150 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 SCGNO76038 276 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 SPART-AS1P0CW21 52 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 NPPCP23582 126 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 G6PCP35575 357 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 LPAR6P43657 344 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 CADM3Q8N126 398 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 PINX1Q96BK5 328 aaKnown RBP9.09□□□□□ -0.95
SS18-219ENST00000581570 MOB3AQ96BX8 217 aa9.09□□□□□ -0.95
SS18-219ENST00000581570 DBX1A6NMT0 343 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 F2RP25116 425 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 NPBWR1P48145 328 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 TMEM17Q86X19 198 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 HOGA1Q86XE5 327 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 TSPAN14Q8NG11 270 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 FCAMRQ8WWV6 532 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 RAB40CQ96S21 281 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 C1QTNF4Q9BXJ3 329 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 XCL2Q9UBD3 114 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 TPRKBQ9Y3C4 175 aa9.08□□□□□ -0.96
SS18-219ENST00000581570 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
SS18-219ENST00000581570 A0A1B0GU03 582 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 SMIM30A4D0T7 59 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 RGS10O43665 173 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 GNRHRP30968 328 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 EMP1P54849 157 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 NUTF2P61970 127 aaKnown RBP9.07□□□□□ -0.96
SS18-219ENST00000581570 ZNF367Q7RTV3 350 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 DCANP1Q8TF63 244 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 BORCS5Q969J3 196 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 TSC22D3Q99576 134 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 DUSP21Q9H596 190 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 RNF167Q9H6Y7 350 aa9.07□□□□□ -0.96
SS18-219ENST00000581570 AGRNO00468 2067 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 TMEM189A5PLL7 270 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 PGLYRP1O75594 196 aaPredicted RBP9.06□□□□□ -0.96
SS18-219ENST00000581570 TMEM50AO95807 157 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 RLN1P04808 185 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 FCER2P06734 321 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 HTN3P15516 51 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 P2RY1P47900 373 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 HERV-K104P61576 105 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 PSMG4Q5JS54 123 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 ZNF114Q8NC26 417 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 METTL26Q96S19 204 aa9.06□□□□□ -0.96
SS18-219ENST00000581570 TRDV1A0A1B0GX56 115 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 NOTOA8MTQ0 251 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 CRYBB3P26998 211 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 FGF9P31371 208 aaPredicted RBP9.05□□□□□ -0.96
SS18-219ENST00000581570 ERHP84090 104 aaKnown RBP9.05□□□□□ -0.96
SS18-219ENST00000581570 DHRS2Q13268 280 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 KCTD21Q4G0X4 260 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 OGFRL1Q5TC84 451 aaPredicted RBP9.05□□□□□ -0.96
SS18-219ENST00000581570 C22orf42Q6IC83 251 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 NARS2Q96I59 477 aaKnown RBP9.05□□□□□ -0.96
SS18-219ENST00000581570 NEU1Q99519 415 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 NIPSNAP3BQ9BS92 247 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 TMED3Q9Y3Q3 217 aa9.05□□□□□ -0.96
SS18-219ENST00000581570 DNAH5Q8TE73 4624 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms