RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 TNXAQ16473 311 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 C19orf54Q5BKX5 351 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 ASPHD1Q5U4P2 390 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 CTRB2Q6GPI1 263 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 EIF5AL1Q6IS14 154 aaKnown RBP6.3□□□□□ -1.4
KPNB1-210ENST00000580573 ALKAL2Q6UX46 152 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 OR1P1Q8NH06 330 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 RNASEH2CQ8TDP1 164 aaKnown RBP6.3□□□□□ -1.4
KPNB1-210ENST00000580573 GNPNAT1Q96EK6 184 aaPredicted RBP6.3□□□□□ -1.4
KPNB1-210ENST00000580573 SSX3Q99909 188 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 WDR61Q9GZS3 305 aaKnown RBP6.3□□□□□ -1.4
KPNB1-210ENST00000580573 SLC25A32Q9H2D1 315 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 TMEM160Q9NX00 188 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 WDR83OSQ9Y284 106 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 MOB4Q9Y3A3 225 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 TIMM9Q9Y5J7 89 aa6.3□□□□□ -1.4
KPNB1-210ENST00000580573 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
KPNB1-210ENST00000580573 H3BUX3 64 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 M0QZK8 103 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 MPDU1O75352 247 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 ACTL6BO94805 426 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 OPN1MWP04001 364 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 OPN1MW2P0DN77 364 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 OPN1MW3P0DN78 364 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 OR13C7P0DN81 318 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 AREGP15514 252 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 ATP6V0CP27449 155 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 GPX4P36969 197 aaPredicted RBP6.29□□□□□ -1.4
KPNB1-210ENST00000580573 IER3P46695 156 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 SULT1A2P50226 295 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 MFAP2P55001 183 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 RAB11AP62491 216 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 CD69Q07108 199 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 FXYD3Q14802 87 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 DEFB112Q30KQ8 113 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 OR8G2PQ6IF36 304 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 Q6YL49 198 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 ETV3LQ6ZN32 361 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 TTC9CQ8N5M4 171 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 OR5R1Q8NH85 324 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 LRRC20Q8TCA0 184 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 TMED6Q8WW62 240 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 CACNG8Q8WXS5 425 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 ARPC1AQ92747 370 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 TAF15Q92804 592 aaKnown RBP eCLIP6.29□□□□□ -1.4
KPNB1-210ENST00000580573 ZNF48Q96MX3 618 aaPredicted RBP6.29□□□□□ -1.4
KPNB1-210ENST00000580573 SLC25A33Q9BSK2 321 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 UQCC1Q9NVA1 299 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 MED9Q9NWA0 146 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 PITPNC1Q9UKF7 332 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 FAM96BQ9Y3D0 163 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 FBXO7Q9Y3I1 522 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 DMRT1Q9Y5R6 373 aa6.29□□□□□ -1.4
KPNB1-210ENST00000580573 F11RQ9Y624 299 aaKnown RBP6.29□□□□□ -1.4
KPNB1-210ENST00000580573 NF1P21359 2839 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 NCBP2LA6PVI3 153 aaKnown RBP6.28□□□□□ -1.4
KPNB1-210ENST00000580573 CORTO00230 105 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 SOX15O60248 233 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 BRI3O95415 125 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 IFNA5P01569 189 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 IGF1P05019 195 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 SNCAP37840 140 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 SUB1P53999 127 aaKnown RBP eCLIP6.28□□□□□ -1.45e-12■■□□□ 13.8
KPNB1-210ENST00000580573 SERF2P84101 59 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 PLGLAQ15195 96 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 SPNS3Q6ZMD2 512 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 BCL6BQ8N143 479 aaPredicted RBP6.28□□□□□ -1.4
KPNB1-210ENST00000580573 LILRB2Q8N423 598 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 OR1L6Q8NGR2 347 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 SGMS2Q8NHU3 365 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 LYPD6BQ8NI32 183 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 SSMEM1Q8WWF3 244 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 SAT2Q96F10 170 aaPredicted RBP6.28□□□□□ -1.4
KPNB1-210ENST00000580573 TMEM68Q96MH6 324 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 HSPB9Q9BQS6 159 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 HINT2Q9BX68 163 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 SH3BGRL3Q9H299 93 aa6.28□□□□□ -1.4
KPNB1-210ENST00000580573 FNDC4Q9H6D8 234 aaPredicted RBP6.28□□□□□ -1.4
KPNB1-210ENST00000580573 PAIP2BQ9ULR5 123 aaKnown RBP6.28□□□□□ -1.4
KPNB1-210ENST00000580573 IGLV11-55A0A075B6I3 123 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 IGKV1OR2-108A0A075B7D4 117 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 UBE2L5PA0A1B0GUS4 154 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 MDFIC2A0A1B0GVS7 189 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 LINC00862A6NCI5 91 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 UMAD1C9J7I0 102 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 TRIM77I1YAP6 450 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 TSPAN9O75954 239 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 IGLV1-40P01703 118 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 IGHG2P01859 326 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 IFNA4P05014 189 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 RAB5CP51148 216 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 GNB1P62873 340 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 RUNX1Q01196 453 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 GAMTQ14353 236 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 NDUFA5Q16718 116 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 AKIRIN2Q53H80 203 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 FAM74A1Q5RGS3 127 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 SLC16A13Q7RTY0 426 aa6.27□□□□□ -1.41
KPNB1-210ENST00000580573 TMEM144Q7Z5S9 345 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms