RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C10orf105Q8TEF2 133 aa10.27□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ATP6V0BQ99437 205 aa10.27□□□□□ -0.77
CDK5RAP3-217ENST00000580287 SLC39A9Q9NUM3 307 aa10.27□□□□□ -0.77
CDK5RAP3-217ENST00000580287 NOTCH2Q04721 2471 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 IGHV2-26A0A0B4J1V2 119 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 MAP1LC3B2A6NCE7 125 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TNFRSF6BO95407 300 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CT45A6P0DMU7 189 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CT45A5P0DMU8 189 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CT45A7P0DMV0 189 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 LDLRAD2Q5SZI1 272 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 MISP3Q96FF7 219 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 MAP1LC3BQ9GZQ8 125 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 HIPK2Q9H2X6 1198 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ABCA2Q9BZC7 2435 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 IGHV3-72A0A0B4J1Y9 119 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 B4DEV8 164 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 IGKV1-16P04430 117 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 BCL2P10415 239 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 RND2P52198 227 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 SPCS3P61009 180 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 SSX2Q16385 188 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ATP6V1FQ16864 119 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 FFAR4Q5NUL3 377 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 C8orf46Q8TAG6 207 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 LHX4Q969G2 390 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 C2orf88Q9BSF0 95 aa10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 MRPL20Q9BYC9 149 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-217ENST00000580287 C15orf62A8K5M9 175 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PMS2P5A8MQ11 134 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 RBFOX2O43251 390 aaKnown RBP eCLIP10.25□□□□□ -0.772e-11■□□□□ 9.3
CDK5RAP3-217ENST00000580287 SOX15O60248 233 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 KIR2DS2P43631 304 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 THBS3P49746 956 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PLXNB1O43157 2135 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 RELBQ01201 579 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR4A47Q6IF82 309 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 NECAP1Q8NC96 275 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR10G4Q8NGN3 311 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 DDB2Q92466 427 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 RPUSD4Q96CM3 377 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PIMREGQ9BSJ6 248 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PCGF1Q9BSM1 259 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 NPCDR1Q9BY65 106 aa10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 AURKAIP1Q9NWT8 199 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TET2Q6N021 2002 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR10A7Q8NGE5 316 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR10G9Q8NGN4 311 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR10G7Q8NGN6 311 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR9G1Q8NH87 305 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CLDN34H7C241 214 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ITGB1BP1O14713 200 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 RRHO14718 337 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TGOLN2O43493 480 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 SNRPCP09234 159 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 MYOD1P15172 320 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PAX2Q02962 417 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR5T1Q8NG75 326 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PITPNC1Q9UKF7 332 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TCF19Q9Y242 345 aa10.24□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TRAV1-1A0A0B4J248 108 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CD1BP29016 333 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 JOSD1Q15040 202 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 LHFPL4Q7Z7J7 247 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PARD6GQ9BYG4 376 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ENY2Q9NPA8 101 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 SLC35D1Q9NTN3 355 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TMEM242Q9NWH2 141 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PRRC2AP48634 2157 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 SRRM4A7MD48 611 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 VWC2LB2RUY7 222 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 IGLV1-47P01700 117 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 GZMBP10144 247 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 VMO1Q7Z5L0 202 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TMEM183AQ8IXX5 376 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 MBD3L1Q8WWY6 194 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ST6GALNAC6Q969X2 333 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ADTRPQ96IZ2 230 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 RITA1Q96K30 269 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CLEC7AQ9BXN2 247 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TIMM9Q9Y5J7 89 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CSPG4Q6UVK1 2322 aa10.23□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 A8MWP6 167 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 C17orf112F2Z3M2 114 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 CIDEAO60543 219 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 HRASP01112 189 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 AMBPP02760 352 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 PNRC1Q12796 327 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 RTL8BQ17RB0 113 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 LBHQ53QV2 105 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 HCP5Q6MZN7 132 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ZNF833PQ6ZTB9 187 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TGIF2LXQ8IUE1 241 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR4P4Q8NGL7 312 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR4X1Q8NH49 305 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 TNFRSF14Q92956 283 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 NAV3Q8IVL0 2385 aa10.22□□□□□ -0.77
CDK5RAP3-217ENST00000580287 FAM90A9PA6NNJ1 464 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms