RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 C2orf70A6NJV1 201 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 A8MWP6 167 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 Q56UQ5 140 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 LCN12Q6JVE5 192 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 SPSB3Q6PJ21 355 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 OR2K2Q8NGT1 345 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 DYNLRB2Q8TF09 96 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 B9D2Q9BPU9 175 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 GAR1Q9NY12 217 aaKnown RBP18.17■□□□□ 0.5
LIMD2-207ENST00000579329 SHPKQ9UHJ6 478 aa18.17■□□□□ 0.5
LIMD2-207ENST00000579329 I3L2K1 104 aa18.16■□□□□ 0.5
LIMD2-207ENST00000579329 SUB1P53999 127 aaKnown RBP eCLIP18.16■□□□□ 0.5
LIMD2-207ENST00000579329 ADAMTSL5Q6ZMM2 481 aa18.16■□□□□ 0.5
LIMD2-207ENST00000579329 UBAC2Q8NBM4 344 aa18.16■□□□□ 0.5
LIMD2-207ENST00000579329 CACFD1Q9UGQ2 172 aa18.16■□□□□ 0.5
LIMD2-207ENST00000579329 SMAD5-AS1Q9Y6J3 95 aa18.16■□□□□ 0.5
LIMD2-207ENST00000579329 SORL1Q92673 2214 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 COL7A1Q02388 2944 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 F8W735 103 aaPredicted RBP18.15■□□□□ 0.5
LIMD2-207ENST00000579329 MT-CO2P00403 227 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 SULT1A3P0DMM9 295 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 SULT1A4P0DMN0 295 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 IL7P13232 177 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 FOLR2P14207 255 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 VAMP1P23763 118 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 MFAP4P55083 255 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 CD69Q07108 199 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 CENPSQ8N2Z9 138 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 PINX1Q96BK5 328 aaKnown RBP18.15■□□□□ 0.5
LIMD2-207ENST00000579329 C7orf50Q9BRJ6 194 aaKnown RBP18.15■□□□□ 0.5
LIMD2-207ENST00000579329 ZNF436Q9C0F3 470 aaPredicted RBP18.15■□□□□ 0.5
LIMD2-207ENST00000579329 PALMDQ9NP74 551 aa18.15■□□□□ 0.5
LIMD2-207ENST00000579329 CENPXA8MT69 81 aa18.14■□□□□ 0.49
LIMD2-207ENST00000579329 CORTO00230 105 aa18.14■□□□□ 0.49
LIMD2-207ENST00000579329 RNASE2P10153 161 aaKnown RBP18.14■□□□□ 0.49
LIMD2-207ENST00000579329 FCGR2BP31994 310 aaPredicted RBP18.14■□□□□ 0.49
LIMD2-207ENST00000579329 CCR6P51684 374 aa18.14■□□□□ 0.49
LIMD2-207ENST00000579329 NMSQ5H8A3 153 aa18.14■□□□□ 0.49
LIMD2-207ENST00000579329 LYZL2Q7Z4W2 148 aa18.14■□□□□ 0.49
LIMD2-207ENST00000579329 TXN2Q99757 166 aa18.14■□□□□ 0.49
LIMD2-207ENST00000579329 UFC1Q9Y3C8 167 aa18.14■□□□□ 0.49
LIMD2-207ENST00000579329 IGHV3-35A0A0C4DH35 117 aa18.13■□□□□ 0.49
LIMD2-207ENST00000579329 LINC00854A0A1B0GVQ3 168 aa18.13■□□□□ 0.49
LIMD2-207ENST00000579329 DUXBA0A1W2PPF3 345 aa18.13■□□□□ 0.49
LIMD2-207ENST00000579329 TMEM213A2RRL7 107 aa18.13■□□□□ 0.49
LIMD2-207ENST00000579329 EDN2P20800 178 aa18.13■□□□□ 0.49
LIMD2-207ENST00000579329 PVRIGQ6DKI7 326 aa18.13■□□□□ 0.49
LIMD2-207ENST00000579329 UNQ9165/PRO28630Q6UXU0 137 aa18.13■□□□□ 0.49
LIMD2-207ENST00000579329 CHRDL1Q9BU40 450 aa18.13■□□□□ 0.49
LIMD2-207ENST00000579329 TECRQ9NZ01 308 aaKnown RBP18.13■□□□□ 0.49
LIMD2-207ENST00000579329 A6NHS1 94 aa18.12■□□□□ 0.49
LIMD2-207ENST00000579329 NDUFB6O95139 128 aa18.12■□□□□ 0.49
LIMD2-207ENST00000579329 SFT2D2O95562 160 aa18.12■□□□□ 0.49
LIMD2-207ENST00000579329 CBLN1P23435 193 aa18.12■□□□□ 0.49
LIMD2-207ENST00000579329 ELLP55199 621 aaPredicted RBP18.12■□□□□ 0.49
LIMD2-207ENST00000579329 TMEM190Q8WZ59 177 aa18.12■□□□□ 0.49
LIMD2-207ENST00000579329 DNAH9Q9NYC9 4486 aa18.12■□□□□ 0.49
LIMD2-207ENST00000579329 CEBPZOSA8MTT3 80 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 NDUFA4O00483 81 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 NUPL2O15504 423 aaKnown RBP18.11■□□□□ 0.49
LIMD2-207ENST00000579329 ADMP35318 185 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 UBE2MP61081 183 aaKnown RBP18.11■□□□□ 0.49
LIMD2-207ENST00000579329 PPP1R1AQ13522 171 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 SMCO1Q147U7 214 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 DEFB114Q30KQ6 69 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 BSXQ3C1V8 233 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 CD300EQ496F6 205 aaPredicted RBP18.11■□□□□ 0.49
LIMD2-207ENST00000579329 LINC00299Q6ZSB3 139 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 LRTM2Q8N967 370 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 CACNG8Q8WXS5 425 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 MARC2Q969Z3 335 aa18.11■□□□□ 0.49
LIMD2-207ENST00000579329 HEYLQ9NQ87 328 aaPredicted RBP18.11■□□□□ 0.49
LIMD2-207ENST00000579329 IZUMO1RA6ND01 250 aa18.1■□□□□ 0.49
LIMD2-207ENST00000579329 CTSGP08311 255 aa18.1■□□□□ 0.49
LIMD2-207ENST00000579329 HTR2BP41595 481 aa18.1■□□□□ 0.49
LIMD2-207ENST00000579329 CNPY1Q3B7I2 92 aa18.1■□□□□ 0.49
LIMD2-207ENST00000579329 TM4SF20Q53R12 229 aa18.1■□□□□ 0.49
LIMD2-207ENST00000579329 UXS1Q8NBZ7 420 aa18.1■□□□□ 0.49
LIMD2-207ENST00000579329 A0A1B0GU03 582 aa18.09■□□□□ 0.49
LIMD2-207ENST00000579329 GNG7O60262 68 aa18.09■□□□□ 0.49
LIMD2-207ENST00000579329 NXPH3O95157 252 aa18.09■□□□□ 0.49
LIMD2-207ENST00000579329 IGHV3-48P01763 117 aa18.09■□□□□ 0.49
LIMD2-207ENST00000579329 RELQ04864 619 aaPredicted RBP18.09■□□□□ 0.49
LIMD2-207ENST00000579329 ANKRD55Q3KP44 614 aa18.09■□□□□ 0.49
LIMD2-207ENST00000579329 DUSP18Q8NEJ0 188 aa18.09■□□□□ 0.49
LIMD2-207ENST00000579329 MRPL27Q9P0M9 148 aaKnown RBP18.09■□□□□ 0.49
LIMD2-207ENST00000579329 C8orf88P0DMB2 117 aa18.08■□□□□ 0.48
LIMD2-207ENST00000579329 BTCP35070 178 aa18.08■□□□□ 0.48
LIMD2-207ENST00000579329 NPBWR1P48145 328 aa18.08■□□□□ 0.48
LIMD2-207ENST00000579329 GTSCR1Q86UQ5 136 aa18.08■□□□□ 0.48
LIMD2-207ENST00000579329 SLC24A4Q8NFF2 622 aa18.08■□□□□ 0.48
LIMD2-207ENST00000579329 CCDC32Q9BV29 185 aa18.08■□□□□ 0.48
LIMD2-207ENST00000579329 HIPK2Q9H2X6 1198 aa18.08■□□□□ 0.48
LIMD2-207ENST00000579329 DAZ1Q9NQZ3 744 aaKnown RBP18.08■□□□□ 0.48
LIMD2-207ENST00000579329 HSPB7Q9UBY9 170 aa18.08■□□□□ 0.48
LIMD2-207ENST00000579329 OPRK1P41145 380 aa18.07■□□□□ 0.48
LIMD2-207ENST00000579329 TNFRSF9Q07011 255 aa18.07■□□□□ 0.48
LIMD2-207ENST00000579329 C2orf83Q53S99 150 aa18.07■□□□□ 0.48
LIMD2-207ENST00000579329 Q8N1Y9 231 aa18.07■□□□□ 0.48
LIMD2-207ENST00000579329 OR1S1Q8NH92 325 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms