RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ATP5SQ99766 215 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 SLA2Q9H6Q3 261 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 FBXL17Q9UF56 701 aa11.01□□□□□ -0.65
CSNK1D-209ENST00000578904 FAM181BA6NEQ2 426 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 CGB1A6NKQ9 187 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 TEX22C9J3V5 150 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 E7EUB6 86 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 FNDC10F2Z333 226 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 AP4M1O00189 453 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 GPX4P36969 197 aaPredicted RBP11□□□□□ -0.65
CSNK1D-209ENST00000578904 RPL15P61313 204 aaKnown RBP11□□□□□ -0.65
CSNK1D-209ENST00000578904 DLK1P80370 383 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 BSXQ3C1V8 233 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 UNQ5815/PRO19632Q6UWF5 114 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 TTC9CQ8N5M4 171 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 TMEM147Q9BVK8 224 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 SMIM3Q9BZL3 60 aa11□□□□□ -0.65
CSNK1D-209ENST00000578904 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
CSNK1D-209ENST00000578904 IGHG2P01859 326 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 CRYGCP07315 174 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 CTRB1P17538 263 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 CRIP2P52943 208 aaPredicted RBP10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 RAB31Q13636 194 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 CLINT1Q14677 625 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 CTRB2Q6GPI1 263 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 UBAC2Q8NBM4 344 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 SLC35E1Q96K37 410 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 P2RX4Q99571 388 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 WNT10AQ9GZT5 417 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 UQCC1Q9NVA1 299 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
CSNK1D-209ENST00000578904 ATP6V0E1O15342 81 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 MPDU1O75352 247 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 SCGB2A1O75556 95 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 IFNA7P01567 189 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 AMY1AP04745 511 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 IGF1P05019 195 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 AREGP15514 252 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 OPRK1P41145 380 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 SSBP2P81877 361 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 LFNGQ8NES3 379 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 STOML3Q8TAV4 291 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 FAM110DQ8TAY7 271 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 GNPNAT1Q96EK6 184 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 PHYHIPLQ96FC7 376 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 HSPB9Q9BQS6 159 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 FAM103A1Q9BTL3 118 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 PARD6GQ9BYG4 376 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 NPVFQ9HCQ7 196 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 BOLA1Q9Y3E2 137 aa10.98□□□□□ -0.65
CSNK1D-209ENST00000578904 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 A0A1B0GW64 132 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 PMS2P5A8MQ11 134 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 SOX15O60248 233 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 FBXO24O75426 580 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 REG1AP05451 166 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 CD69Q07108 199 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 ECSCRQ19T08 205 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 BAP18Q8IXM2 172 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 ZNF709Q8N972 641 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 MISP3Q96FF7 219 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 KCNIP2Q9NS61 270 aa10.97□□□□□ -0.65
CSNK1D-209ENST00000578904 SMCO3A2RU48 225 aa10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 SH2D7A6NKC9 451 aaPredicted RBP10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 C17orf112F2Z3M2 114 aa10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 H3BUA1 57 aa10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 APELAP0DMC3 54 aa10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 NDPQ00604 133 aa10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 AKR1C1Q04828 323 aa10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 RPL7L1Q6DKI1 246 aaKnown RBP10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 PVRIGQ6DKI7 326 aa10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 ST8SIA2Q92186 375 aa10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 TAF15Q92804 592 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSNK1D-209ENST00000578904 EGR2P11161 476 aaPredicted RBP10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 BLCAPP62952 87 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 SLC35B1P78383 322 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 KRTAP24-1Q3LI83 254 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 ZNF767PQ75MW2 155 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 SLC16A13Q7RTY0 426 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 HAPLN4Q86UW8 402 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 OR5T1Q8NG75 326 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 CYTL1Q9NRR1 136 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 ZNF355PQ9NSJ1 428 aa10.95□□□□□ -0.66
CSNK1D-209ENST00000578904 UBE2L5PA0A1B0GUS4 154 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 PRSS46E5RG02 174 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 NDUFA7O95182 113 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 TEPPQ6URK8 271 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 TEX261Q6UWH6 196 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 Q6ZSV7 163 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 OR2T6Q8NHC8 308 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 TMEM170AQ8WVE7 144 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 BSCL2Q96G97 398 aaPredicted RBP10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 CXorf58Q96LI9 332 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 GINS3Q9BRX5 216 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 ZNF702PQ9H963 129 aa10.94□□□□□ -0.66
CSNK1D-209ENST00000578904 GAR1Q9NY12 217 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms