RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 K7EPK0 472 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 OR2J3O76001 311 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 TMEM50AO95807 157 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 FCGR2BP31994 310 aaPredicted RBP9.83□□□□□ -0.84
MKS1-206ENST00000577824 SUB1P53999 127 aaKnown RBP eCLIP9.83□□□□□ -0.84
MKS1-206ENST00000577824 PAX9P55771 341 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 FHL3Q13643 280 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 EXOSC2Q13868 293 aaKnown RBP9.83□□□□□ -0.84
MKS1-206ENST00000577824 FCN2Q15485 313 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 C15orf32Q32M92 178 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 NOXA1Q86UR1 476 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 RNASEH2CQ8TDP1 164 aaKnown RBP9.83□□□□□ -0.84
MKS1-206ENST00000577824 CXorf58Q96LI9 332 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 RAB40CQ96S21 281 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 MAGT1Q9H0U3 335 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 MED28Q9H204 178 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 GSKIPQ9P0R6 139 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 FBXL7Q9UJT9 491 aa9.83□□□□□ -0.84
MKS1-206ENST00000577824 MFSD2BA6NFX1 497 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 PRSS46E5RG02 174 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 SSSCA1O60232 199 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 TSC22D2O75157 780 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 NDUFB8O95169 186 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 SIX6O95475 246 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 SCGB1D2O95969 90 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 IAPPP10997 89 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 DEFA5Q01523 94 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 RAB32Q13637 225 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 KHDC1LQ5JSQ8 128 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 HIST2H2BDQ6DRA6 164 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 ETV3LQ6ZN32 361 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 C18orf65Q6ZTR6 163 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 KLHL30-AS1Q8NEE0 82 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 SMIM8Q96KF7 97 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 CCDC140Q96MF4 163 aa9.82□□□□□ -0.84
MKS1-206ENST00000577824 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.81□□□□□ -0.84
MKS1-206ENST00000577824 TRBV7-1A0A0A6YYK4 115 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 F8W735 103 aaPredicted RBP9.81□□□□□ -0.84
MKS1-206ENST00000577824 WRBO00258 174 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 DEDDO75618 318 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 GIPP09681 153 aaPredicted RBP9.81□□□□□ -0.84
MKS1-206ENST00000577824 RPP30P78346 268 aaKnown RBP9.81□□□□□ -0.84
MKS1-206ENST00000577824 ATP5G2Q06055 141 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 SLC25A24Q6NUK1 477 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 ZNF502Q8TBZ5 544 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 PPP1R1CQ8WVI7 109 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 EEF1AKMT3Q96AZ1 226 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 OR4C12Q96R67 309 aa9.81□□□□□ -0.84
MKS1-206ENST00000577824 M0QZ24 198 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 MT-CO2P00403 227 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 IFNA10P01566 189 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 TMEM14EPQ6UXP3 125 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 C8orf86Q6ZUL3 223 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 OR4F17Q8NGA8 305 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 SCARB1Q8WTV0 552 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 WDR89Q96FK6 387 aaPredicted RBP9.8□□□□□ -0.84
MKS1-206ENST00000577824 RAX2Q96IS3 184 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 OR4F4Q96R69 305 aa9.8□□□□□ -0.84
MKS1-206ENST00000577824 ZNF436Q9C0F3 470 aaPredicted RBP9.8□□□□□ -0.84
MKS1-206ENST00000577824 FNDC4Q9H6D8 234 aaPredicted RBP9.8□□□□□ -0.84
MKS1-206ENST00000577824 LYRM2Q9NU23 88 aaPredicted RBP9.8□□□□□ -0.84
MKS1-206ENST00000577824 PKD1L1Q8TDX9 2849 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 A0A1W2PRX2 142 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 PMS2P5A8MQ11 134 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 NUDT19A8MXV4 375 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 H3BP45 60 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 SCAF4O95104 1147 aaKnown RBP9.79□□□□□ -0.84
MKS1-206ENST00000577824 IGHV3-11P01762 117 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 PET100P0DJ07 73 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 LYL1P12980 280 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 S100A10P60903 97 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 RAB11AP62491 216 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 NSUN5P1Q3KNT7 163 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 TMEM116Q8NCL8 245 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 CHAC2Q8WUX2 184 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 MISP3Q96FF7 219 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 TXN2Q99757 166 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 C21orf62Q9NYP8 219 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 PSENENQ9NZ42 101 aa9.79□□□□□ -0.84
MKS1-206ENST00000577824 STRAPQ9Y3F4 350 aaKnown RBP9.79□□□□□ -0.84
MKS1-206ENST00000577824 LSM5Q9Y4Y9 91 aaKnown RBP9.79□□□□□ -0.84
MKS1-206ENST00000577824 RPS10-NUDT3A0A1W2PQS6 291 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 H0YIZ8 118 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 MPC2O95563 127 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 OR8U8P0C7N1 319 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 SLC25A4P12235 298 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 PVALBP20472 110 aaPredicted RBP9.78□□□□□ -0.84
MKS1-206ENST00000577824 MYCNOSP40205 109 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 OPRK1P41145 380 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 RAP2BP61225 183 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 CD69Q07108 199 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 ZNF616Q08AN1 781 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 DEFB136Q30KP8 78 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 SPANXN5Q5MJ07 72 aa9.78□□□□□ -0.84
MKS1-206ENST00000577824 BSCL2Q96G97 398 aaPredicted RBP9.78□□□□□ -0.84
MKS1-206ENST00000577824 RANGRFQ9HD47 186 aaPredicted RBP9.78□□□□□ -0.84
MKS1-206ENST00000577824 GAR1Q9NY12 217 aaKnown RBP9.78□□□□□ -0.84
MKS1-206ENST00000577824 PEF1Q9UBV8 284 aaKnown RBP9.78□□□□□ -0.84
MKS1-206ENST00000577824 IGHV4OR15-8A0A075B7B6 117 aa9.77□□□□□ -0.85
MKS1-206ENST00000577824 A0A087WW49 117 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms