RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 LRRC25Q8N386 305 aaPredicted RBP0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST1H2BHQ93079 126 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 ADAT3Q96EY9 351 aaPredicted RBP0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST1H2BNQ99877 126 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST1H2BMQ99879 126 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 NIPSNAP1Q9BPW8 284 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 DCSTAMPQ9H295 470 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 XAGE1AQ9HD64 81 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.49□□□□□ -2.33
TOP2A-202ENST00000577541 UQCC1Q9NVA1 299 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 VPS29Q9UBQ0 182 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 LSM5Q9Y4Y9 91 aaKnown RBP0.49□□□□□ -2.33
TOP2A-202ENST00000577541 NUP155O75694 1391 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 TRAV3A0A0B4J244 114 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 A0A1B0GW54 56 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 hADV38S2A0JD32 116 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 PSMD12O00232 456 aaPredicted RBP0.48□□□□□ -2.33
TOP2A-202ENST00000577541 SLC22A1O15245 554 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 HCRTO43612 131 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 FADS1O60427 444 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 ZNF682O95780 498 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 C1QAP02745 245 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 TTRP02766 147 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 GPX1P07203 203 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 CTXN2P0C2S0 81 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 UBBP0CG47 229 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 CD79AP11912 226 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 POLR2GP62487 172 aaKnown RBP eCLIP0.48□□□□□ -2.33
TOP2A-202ENST00000577541 BATFQ16520 125 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 DEFB113Q30KQ7 82 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 C12orf74Q32Q52 190 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 IBA57Q5T440 356 aaKnown RBP0.48□□□□□ -2.33
TOP2A-202ENST00000577541 OR6V1Q8N148 313 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 OR8B3Q8NGG8 313 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 OR52L1Q8NGH7 329 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 MBD3L1Q8WWY6 194 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 SLC7A6Q92536 515 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 ITFG2Q969R8 447 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 PPP1R14BQ96C90 147 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 DOHHQ9BU89 302 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 ADAT1Q9BUB4 502 aaKnown RBP0.48□□□□□ -2.33
TOP2A-202ENST00000577541 REG4Q9BYZ8 158 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 OR51V1Q9H2C8 321 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 DOK5Q9P104 306 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 RSL24D1Q9UHA3 163 aaKnown RBP0.48□□□□□ -2.33
TOP2A-202ENST00000577541 DOCK5Q9H7D0 1870 aa0.48□□□□□ -2.33
TOP2A-202ENST00000577541 PQLC2LA1A4F0 135 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 TRAPPC13A5PLN9 417 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 C2orf70A6NJV1 201 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 B4DSR2 109 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 CLDN25C9JDP6 229 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 M0R036 132 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 NOS1APO75052 506 aaPredicted RBP0.47□□□□□ -2.33
TOP2A-202ENST00000577541 HAND1O96004 215 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 PMP2P02689 132 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 SMIM10L2AP0DMW4 78 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 SMIM10L2BP0DMW5 78 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 AKR1C3P42330 323 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 CAV1Q03135 178 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 CDK10Q15131 360 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 LINC01554Q52M75 96 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 C10orf55Q5SWW7 151 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 CCDC122Q5T0U0 273 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 SPOPLQ6IQ16 392 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 C20orf196Q8IYI0 205 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 TMEM86AQ8N2M4 240 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 SIGLECL1Q8N7X8 197 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 OR13C4Q8NGS5 318 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 DNAJC9Q8WXX5 260 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 AQP3Q92482 292 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 TOMM6Q96B49 74 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 TLNRD1Q9H1K6 362 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 CST9LQ9H4G1 147 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 FAM96AQ9H5X1 160 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 C8orf4Q9NR00 106 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 PRTFDC1Q9NRG1 225 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 TMEM56-RWDD3S4R434 201 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 RTTNQ86VV8 2226 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 ZNF106Q9H2Y7 1883 aaKnown RBP0.47□□□□□ -2.33
TOP2A-202ENST00000577541 FLG2Q5D862 2391 aaPredicted RBP0.47□□□□□ -2.33
TOP2A-202ENST00000577541 CACNA1BQ00975 2339 aa0.47□□□□□ -2.33
TOP2A-202ENST00000577541 HEATR5BQ9P2D3 2071 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 MEIKINA0A087WXM9 373 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 FAM159BA6NKW6 160 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 C19orf84I3L1E1 186 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 OR2T1O43869 369 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 RPP14O95059 124 aaKnown RBP0.46□□□□□ -2.34
TOP2A-202ENST00000577541 CRYZL1O95825 349 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 RPSAP08865 295 aaKnown RBP0.46□□□□□ -2.34
TOP2A-202ENST00000577541 SMIM17P0DL12 118 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 RNASE4P34096 147 aaKnown RBP0.46□□□□□ -2.34
TOP2A-202ENST00000577541 SSR2P43308 183 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 EMP1P54849 157 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 PSME3P61289 254 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 HIST1H4AP62805 103 aaKnown RBP0.46□□□□□ -2.34
TOP2A-202ENST00000577541 CCL7P80098 99 aa0.46□□□□□ -2.34
TOP2A-202ENST00000577541 SRSF6Q13247 344 aaKnown RBP0.46□□□□□ -2.34
TOP2A-202ENST00000577541 RNASE10Q5GAN6 216 aaKnown RBP0.46□□□□□ -2.34
TOP2A-202ENST00000577541 RPL22L1Q6P5R6 122 aaKnown RBP0.46□□□□□ -2.34
TOP2A-202ENST00000577541 ZNF826PQ6ZT77 177 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms