RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 KCNIP2Q9NS61 270 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 COL27A1Q8IZC6 1860 aaPredicted RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 C15orf61A6NNL5 157 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 K7EM74 188 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 RBFOX2O43251 390 aaKnown RBP eCLIP4.37□□□□□ -1.71
VAPA-203ENST00000577539 IGHV1-46P01743 117 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 IGHV3-48P01763 117 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 AMBPP02760 352 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 HIST1H1BP16401 226 aaKnown RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 IL3RAP26951 378 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 GCHFRP30047 84 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 RPL31P62899 125 aaKnown RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 PSG5Q15238 335 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 USF2Q15853 346 aaPredicted RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 C17orf58Q2M2W7 97 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 IGFL2Q6UWQ7 119 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 TCF23Q7RTU1 214 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 TMEM183AQ8IXX5 376 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 C1orf174Q8IYL3 243 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 OR10G8Q8NGN5 311 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 IDI2-AS1Q9NZ38 188 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 FAM215AQ9Y5M1 114 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 ZNF729A6NN14 1252 aaPredicted RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 SLC17A3O00476 420 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 FOXH1O75593 365 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 VENTXO95231 258 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 OR10J4P0C629 311 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 CCL3L1P16619 93 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 OR10J1P30954 320 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 MFAP4P55083 255 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 MLANAQ16655 118 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 VWC2Q2TAL6 325 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 MIR17HGQ75NE6 70 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 COMMD5Q9GZQ3 224 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 A0A1B0GUS0 222 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 hADV38S2A0JD32 116 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 NKX6-3A6NJ46 265 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 DVL1O14640 695 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 APOA2P02652 100 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 IGKV1-16P04430 117 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 STAG3L2P0CL84 134 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 STAG3L3P0CL85 134 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 SRP14P37108 136 aaKnown RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 RAB4BP61018 213 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 EFNB3Q15768 340 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 TMEM170AQ8WVE7 144 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 SFRP2Q96HF1 295 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 ADTRPQ96IZ2 230 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 SERTAD4Q9NUC0 356 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 DKK2Q9UBU2 259 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 YTHDF2Q9Y5A9 579 aaKnown RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 MUC6Q6W4X9 2439 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 PLXNB1O43157 2135 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 GRIFINA4D1Z8 144 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 ZNF705FA8MVS1 300 aaPredicted RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 PRRG2O14669 202 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 ENSAO43768 121 aaKnown RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 CRYABP02511 175 aaKnown RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 ZNF705DP0CH99 300 aaPredicted RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 ZNF705BP0CI00 300 aaPredicted RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 MGST1P10620 155 aaKnown RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 CHRNB4P30926 498 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 CNN1P51911 297 aaKnown RBP4.36□□□□□ -1.71
VAPA-203ENST00000577539 ERVFC1-1P60608 527 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 TMEM108Q6UXF1 575 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 OR10W1Q8NGF6 305 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 OR10X1Q8NGY0 326 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 OR52E5Q8NH55 327 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 HARBI1Q96MB7 349 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 IMMP2LQ96T52 175 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 PRNDQ9UKY0 176 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 DSCAMO60469 2012 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 MGAQ8IWI9 3026 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 TCL1AP56279 114 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 SLC35B1P78383 322 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 Q8N7P7 452 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 GAFA1Q96PS6 74 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 NABP2Q9BQ15 211 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 DYNLRB1Q9NP97 96 aa4.36□□□□□ -1.71
VAPA-203ENST00000577539 TRBV20OR9-2A0A075B6H5 130 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 GGCTO75223 188 aaKnown RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 OR4A8P0C604 315 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 APELAP0DMC3 54 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 CBLN1P23435 193 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 CRYBB3P26998 211 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 CFHR2P36980 270 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 PRB3Q04118 309 aaPredicted RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 OR5I1Q13606 314 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 STUMQ69YW2 141 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 OR9G1Q8NH87 305 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 PYGO2Q9BRQ0 406 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 PIMREGQ9BSJ6 248 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 MRPL20Q9BYC9 149 aaKnown RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 TLN1Q9Y490 2541 aaKnown RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 MALRD1Q5VYJ5 2156 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 BOD1L1Q8NFC6 3051 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 IGHV3-72A0A0B4J1Y9 119 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 SRRM4A7MD48 611 aaKnown RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 C16orf97H3BN30 126 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms