RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 DMRT1Q9Y5R6 373 aa9.77□□□□□ -0.85
CDK5RAP3-203ENST00000577442 CORTO00230 105 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 BMPR1BO00238 502 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 WIPF1O43516 503 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 GGCTO75223 188 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 ARL3P36405 182 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 MFAP2P55001 183 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 TNFRSF9Q07011 255 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 CLEC19AQ6UXS0 136 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 NOXA1Q86UR1 476 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 MISP3Q96FF7 219 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 OR4C12Q96R67 309 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 C21orf62Q9NYP8 219 aa9.76□□□□□ -0.85
CDK5RAP3-203ENST00000577442 TRAV6A0A075B6T7 132 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 FAM90A26D6RGX4 464 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 K7EIM0 57 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 SAP30O75446 220 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 IFNA21P01568 189 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 IGHV3-23P01764 117 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 HOXB5P09067 269 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 H2AFB2P0C5Z0 115 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 GPR183P32249 361 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 HTR2BP41595 481 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 DEFA6Q01524 100 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 KLF5Q13887 457 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 SPSB3Q6PJ21 355 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 REC114Q7Z4M0 266 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 BSCL2Q96G97 398 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 HIPK2Q9H2X6 1198 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 PEMTQ9UBM1 199 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 HSPB7Q9UBY9 170 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 S4R3C0 116 aa9.75□□□□□ -0.85
CDK5RAP3-203ENST00000577442 PPP5D1E7EU14 171 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 TGOLN2O43493 480 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 MED6O75586 246 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 EGFEM1PQ0D2K5 195 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 FAM106AQ4KMX7 169 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 GGNBP1Q5YKI7 109 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 ACSM6Q6P461 480 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 PLET1Q6UQ28 207 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 SLC24A4Q8NFF2 622 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 OR9G4Q8NGQ1 327 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 SCARB1Q8WTV0 552 aa9.74□□□□□ -0.85
CDK5RAP3-203ENST00000577442 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 I3L2K1 104 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 PITX3O75364 302 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 SCGB2A1O75556 95 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 NXPH3O95157 252 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 LY86O95711 162 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 MT-CO2P00403 227 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 CLEC3BP05452 202 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 FCGR2BP31994 310 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 MFAP4P55083 255 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 ATP5IP56385 69 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 BSXQ3C1V8 233 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 C2orf83Q53S99 150 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 Q56UQ5 140 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 PVRIGQ6DKI7 326 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 GPHB5Q86YW7 130 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 DTD1Q8TEA8 209 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 MITD1Q8WV92 249 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 PINX1Q96BK5 328 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 CIB3Q96Q77 187 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 TXN2Q99757 166 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 U3KQ87 197 aa9.73□□□□□ -0.85
CDK5RAP3-203ENST00000577442 PRKDCP78527 4128 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 IGHV3-21A0A0B4J1V1 117 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 OR2T8A6NH00 312 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 LGALS9O00182 355 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 OR2C1O95371 312 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 NPY1RP25929 384 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 NPBWR1P48145 328 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 IFITM3Q01628 133 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 UBAC2Q8NBM4 344 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 DUSP18Q8NEJ0 188 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 RNASEH2CQ8TDP1 164 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 ZNF431Q8TF32 576 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 RBKSQ9H477 322 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 PALMDQ9NP74 551 aa9.72□□□□□ -0.85
CDK5RAP3-203ENST00000577442 WRBO00258 174 aa9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 NUPL2O15504 423 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 ADAP1O75689 374 aa9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 IFNA10P01566 189 aa9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 IL5P05113 134 aa9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 OPRK1P41145 380 aa9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 RELQ04864 619 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 DCTN2Q13561 401 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 OR52B4Q8NGK2 314 aa9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 GPN1Q9HCN4 374 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 SIGLEC8Q9NYZ4 499 aa9.71□□□□□ -0.86
CDK5RAP3-203ENST00000577442 A8MWP6 167 aa9.7□□□□□ -0.86
CDK5RAP3-203ENST00000577442 SYNGR2O43760 224 aa9.7□□□□□ -0.86
CDK5RAP3-203ENST00000577442 GNG7O60262 68 aa9.7□□□□□ -0.86
CDK5RAP3-203ENST00000577442 PRAF2O60831 178 aa9.7□□□□□ -0.86
CDK5RAP3-203ENST00000577442 RPP30P78346 268 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-203ENST00000577442 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
CDK5RAP3-203ENST00000577442 NRARPQ7Z6K4 114 aa9.7□□□□□ -0.86
CDK5RAP3-203ENST00000577442 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms