RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 GINS3Q9BRX5 216 aa8.64□□□□□ -1.03
CDH8-202ENST00000577228 NXF2Q9GZY0 626 aaKnown RBP8.64□□□□□ -1.03
CDH8-202ENST00000577228 FXYD6Q9H0Q3 95 aa8.64□□□□□ -1.03
CDH8-202ENST00000577228 TMEM14BQ9NUH8 114 aa8.64□□□□□ -1.03
CDH8-202ENST00000577228 GPR31O00270 319 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 GNG7O60262 68 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 MT-CO2P00403 227 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 IGHV3-48P01763 117 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 PMP2P02689 132 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 CD5P06127 495 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 TAS2R46P59540 309 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 VBP1P61758 197 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 CTF1Q16619 201 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 OR5H2Q8NGV7 314 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 ANAPC10Q9UM13 185 aa8.63□□□□□ -1.03
CDH8-202ENST00000577228 IGLL5B9A064 214 aa8.62□□□□□ -1.03
CDH8-202ENST00000577228 DNASE2O00115 360 aaPredicted RBP8.62□□□□□ -1.03
CDH8-202ENST00000577228 ST8SIA3O43173 380 aa8.62□□□□□ -1.03
CDH8-202ENST00000577228 XRCC3O43542 346 aa8.62□□□□□ -1.03
CDH8-202ENST00000577228 DFFBO76075 338 aa8.62□□□□□ -1.03
CDH8-202ENST00000577228 DEFB131AP59861 70 aa8.62□□□□□ -1.03
CDH8-202ENST00000577228 LEMD1Q68G75 181 aa8.62□□□□□ -1.03
CDH8-202ENST00000577228 CLVS1Q8IUQ0 354 aaPredicted RBP8.62□□□□□ -1.03
CDH8-202ENST00000577228 ST8SIA2Q92186 375 aa8.62□□□□□ -1.03
CDH8-202ENST00000577228 PINX1Q96BK5 328 aaKnown RBP8.62□□□□□ -1.03
CDH8-202ENST00000577228 C11orf94C9JXX5 98 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 TMEM127O75204 238 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 S100GP29377 79 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 RPS19P39019 145 aaKnown RBP8.61□□□□□ -1.03
CDH8-202ENST00000577228 RPL11P62913 178 aaKnown RBP8.61□□□□□ -1.03
CDH8-202ENST00000577228 PRCDQ00LT1 54 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 PHLDA2Q53GA4 152 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 TMEM69Q5SWH9 247 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 TOMM20LQ6UXN7 152 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 ZNF114Q8NC26 417 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 OR6F1Q8NGZ6 308 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 OR4A16Q8NH70 328 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 S100A16Q96FQ6 103 aaKnown RBP8.61□□□□□ -1.03
CDH8-202ENST00000577228 RBM38Q9H0Z9 239 aaKnown RBP8.61□□□□□ -1.03
CDH8-202ENST00000577228 MS4A6AQ9H2W1 248 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 VSIRQ9H7M9 311 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 APLNQ9ULZ1 77 aa8.61□□□□□ -1.03
CDH8-202ENST00000577228 TRAV2A0A0B4J234 112 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 IGHV3-66A0A0C4DH42 116 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 APOHP02749 345 aaPredicted RBP8.6□□□□□ -1.03
CDH8-202ENST00000577228 NAT1P18440 290 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 NPBWR1P48145 328 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 TAS2R20P59543 309 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 ERHP84090 104 aaKnown RBP8.6□□□□□ -1.03
CDH8-202ENST00000577228 SPCS2Q15005 226 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 UBE2NLQ5JXB2 153 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 STHQ8IWL8 128 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 LILRB2Q8N423 598 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 Q8NAQ8 132 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 DUSP18Q8NEJ0 188 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 SEC22AQ96IW7 307 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 HRH4Q9H3N8 390 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 TMEM231Q9H6L2 316 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 FAM212BQ9NTI7 297 aaPredicted RBP8.6□□□□□ -1.03
CDH8-202ENST00000577228 RABAC1Q9UI14 185 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 PUS1Q9Y606 427 aaKnown RBP eCLIP8.6□□□□□ -1.03
CDH8-202ENST00000577228 HECTD4Q9Y4D8 3996 aa8.6□□□□□ -1.03
CDH8-202ENST00000577228 IGHV4-28A0A0C4DH34 117 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 HLA-DMAP28067 261 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 HRH1P35367 487 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 TMBIM6P55061 237 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 HSPE1P61604 102 aaKnown RBP8.59□□□□□ -1.03
CDH8-202ENST00000577228 LPCAT3Q6P1A2 487 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 ZNF600Q6ZNG1 722 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 TBC1D26Q86UD7 250 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 FAM24BQ8N5W8 94 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 SAMD12Q8N8I0 201 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 MRGPRFQ96AM1 343 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 ZFAND3Q9H8U3 227 aa8.59□□□□□ -1.03
CDH8-202ENST00000577228 H3BMQ9 156 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 IGKV1-39P01597 117 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 IGKV1D-39P04432 117 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 RBMY1A1P0DJD3 496 aaKnown RBP8.58□□□□□ -1.04
CDH8-202ENST00000577228 RBMY1CP0DJD4 496 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 HLA-DMBP28068 263 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 PRSS3P35030 304 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 TSPAN5P62079 268 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 RBMY1FQ15415 496 aaKnown RBP8.58□□□□□ -1.04
CDH8-202ENST00000577228 TMEM41BQ5BJD5 291 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 SPINK9Q5DT21 86 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 LYSMD2Q8IV50 215 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 CROCCP3Q8IVE0 287 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 CENPSQ8N2Z9 138 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 RAB2BQ8WUD1 216 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 VPS13DQ5THJ4 4388 aa8.58□□□□□ -1.04
CDH8-202ENST00000577228 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
CDH8-202ENST00000577228 A0A1B0GU03 582 aa8.57□□□□□ -1.04
CDH8-202ENST00000577228 A0A1W2PS18 150 aa8.57□□□□□ -1.04
CDH8-202ENST00000577228 GIG44P09565 113 aaPredicted RBP8.57□□□□□ -1.04
CDH8-202ENST00000577228 SPP1P10451 314 aa8.57□□□□□ -1.04
CDH8-202ENST00000577228 MIFP14174 115 aa8.57□□□□□ -1.04
CDH8-202ENST00000577228 NPPCP23582 126 aa8.57□□□□□ -1.04
CDH8-202ENST00000577228 SNCAP37840 140 aa8.57□□□□□ -1.04
CDH8-202ENST00000577228 MORN3Q6PF18 240 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms