RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CCL24O00175 119 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 SYNGR2O43760 224 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 IAPPP10997 89 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 MYCNOSP40205 109 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 BSXQ3C1V8 233 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 FAM209BQ5JX69 171 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 NOXA1Q86UR1 476 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 OR11H1Q8NG94 326 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 DPF1Q92782 380 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 C2orf50Q96LR7 162 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 U3KQ87 197 aa10.82□□□□□ -0.68
RPAIN-217ENST00000575711 TRBV7-1A0A0A6YYK4 115 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 MFSD2BA6NFX1 497 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 LY86O95711 162 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 IFNA10P01566 189 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 HSPB1P04792 205 aaKnown RBP10.81□□□□□ -0.68
RPAIN-217ENST00000575711 NPY1RP25929 384 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 POLR2GP62487 172 aaKnown RBP eCLIP10.81□□□□□ -0.68
RPAIN-217ENST00000575711 ZNF616Q08AN1 781 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 C2orf83Q53S99 150 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 C11orf87Q6NUJ2 197 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 OR1N2Q8NGR9 330 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 VN1R17PQ8TDU5 208 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 PINX1Q96BK5 328 aaKnown RBP10.81□□□□□ -0.68
RPAIN-217ENST00000575711 RAX2Q96IS3 184 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 DUX3Q96PT4 197 aa10.81□□□□□ -0.68
RPAIN-217ENST00000575711 RANGRFQ9HD47 186 aaPredicted RBP10.81□□□□□ -0.68
RPAIN-217ENST00000575711 PEF1Q9UBV8 284 aaKnown RBP10.81□□□□□ -0.68
RPAIN-217ENST00000575711 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.8□□□□□ -0.68
RPAIN-217ENST00000575711 ANKRD34BA5PLL1 514 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 LINC01619G3V211 115 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 K7EIM0 57 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 IGHV3-23P01764 117 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 ATP5IP56385 69 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-217ENST00000575711 RPP30P78346 268 aaKnown RBP10.8□□□□□ -0.68
RPAIN-217ENST00000575711 PRR31Q5SQ13 230 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 PVRIGQ6DKI7 326 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 ETV3LQ6ZN32 361 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 MGAT4CQ9UBM8 478 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 S4R3C0 116 aa10.8□□□□□ -0.68
RPAIN-217ENST00000575711 IGHV4OR15-8A0A075B7B6 117 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 A0A087WW49 117 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 IGHV3-21A0A0B4J1V1 117 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 I3L2K1 104 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 SSSCA1O60232 199 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 SIX6O95475 246 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 MT-CO2P00403 227 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 MBPP02686 304 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-217ENST00000575711 OR8U8P0C7N1 319 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 OPRK1P41145 380 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 FHL3Q13643 280 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 CLEC19AQ6UXS0 136 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 ZNF502Q8TBZ5 544 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 RNASEH2CQ8TDP1 164 aaKnown RBP10.79□□□□□ -0.68
RPAIN-217ENST00000575711 SCARB1Q8WTV0 552 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 CCDC140Q96MF4 163 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 RAB40CQ96S21 281 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
RPAIN-217ENST00000575711 RPS10-NUDT3A0A1W2PQS6 291 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 TRBV12-3P01733 135 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 IFNA4P05014 189 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 ZP3P21754 424 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 S100A10P60903 97 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 RAB11AP62491 216 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 CYCSP99999 105 aaKnown RBP10.78□□□□□ -0.68
RPAIN-217ENST00000575711 UBAC2Q8NBM4 344 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 TMEM170AQ8WVE7 144 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 NMES1Q9C002 83 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 MED28Q9H204 178 aa10.78□□□□□ -0.68
RPAIN-217ENST00000575711 PAIP2BQ9ULR5 123 aaKnown RBP10.78□□□□□ -0.68
RPAIN-217ENST00000575711 RCL1Q9Y2P8 373 aaKnown RBP10.78□□□□□ -0.68
RPAIN-217ENST00000575711 LSM5Q9Y4Y9 91 aaKnown RBP10.78□□□□□ -0.68
RPAIN-217ENST00000575711 H3BP45 60 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 K7EPK0 472 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 L7N2F9 121 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 CLEC3BP05452 202 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 GPR183P32249 361 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 MFAP4P55083 255 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 VAMP2P63027 116 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 RPEL1Q2QD12 228 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 Q56UQ5 140 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 SPANXN5Q5MJ07 72 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 ETFRF1Q6IPR1 90 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 LINC00482Q8N8I6 264 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 SMIM8Q96KF7 97 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 GAR1Q9NY12 217 aaKnown RBP10.77□□□□□ -0.69
RPAIN-217ENST00000575711 PSENENQ9NZ42 101 aa10.77□□□□□ -0.69
RPAIN-217ENST00000575711 STRAPQ9Y3F4 350 aaKnown RBP10.77□□□□□ -0.69
RPAIN-217ENST00000575711 C15orf62A8K5M9 175 aa10.76□□□□□ -0.69
RPAIN-217ENST00000575711 PPP5D1E7EU14 171 aa10.76□□□□□ -0.69
RPAIN-217ENST00000575711 GGCTO75223 188 aaKnown RBP10.76□□□□□ -0.69
RPAIN-217ENST00000575711 IGHV3-48P01763 117 aa10.76□□□□□ -0.69
RPAIN-217ENST00000575711 CD33P20138 364 aa10.76□□□□□ -0.69
RPAIN-217ENST00000575711 PVALBP20472 110 aaPredicted RBP10.76□□□□□ -0.69
RPAIN-217ENST00000575711 HOXD3P31249 432 aaPredicted RBP10.76□□□□□ -0.69
RPAIN-217ENST00000575711 ARL3P36405 182 aa10.76□□□□□ -0.69
RPAIN-217ENST00000575711 SLURP1P55000 103 aa10.76□□□□□ -0.69
RPAIN-217ENST00000575711 H2BFSP57053 126 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms