RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	RCL1	Q9Y2P8	373 aa	Known RBP	11.19	□□□□□ -0.62
ABR-223	ENST00000573895		U3KQ87	197 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	MSGN1	A6NI15	193 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895		G3V318	75 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895		G3V3Q6	166 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895		H0YIZ8	118 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	SSSCA1	O60232	199 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	TSC22D2	O75157	780 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	SCAF4	O95104	1147 aa	Known RBP	11.18	□□□□□ -0.62
ABR-223	ENST00000573895	NXPH3	O95157	252 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	NUP62	P37198	522 aa	Predicted RBP	11.18	□□□□□ -0.62
ABR-223	ENST00000573895	HOXA1	P49639	335 aa	Predicted RBP	11.18	□□□□□ -0.62
ABR-223	ENST00000573895	SUB1	P53999	127 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
ABR-223	ENST00000573895	SSBP2	P81877	361 aa	Predicted RBP	11.18	□□□□□ -0.62
ABR-223	ENST00000573895	NDP	Q00604	133 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	AKIRIN2	Q53H80	203 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	ZNF546	Q86UE3	836 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	C4orf3	Q8WVX3	66 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	C11orf1	Q9H5F2	150 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	PSENEN	Q9NZ42	101 aa		11.18	□□□□□ -0.62
ABR-223	ENST00000573895	CGB1	A6NKQ9	187 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	CCL24	O00175	119 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	MYOD1	P15172	320 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	SNCA	P37840	140 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	HTR2B	P41595	481 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	PAX9	P55771	341 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	RUNX1	Q01196	453 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	CD300C	Q08708	224 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	KIAA0141	Q14154	515 aa	Predicted RBP	11.17	□□□□□ -0.62
ABR-223	ENST00000573895	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.17	□□□□□ -0.62
ABR-223	ENST00000573895	RAX2	Q96IS3	184 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	SLC25A31	Q9H0C2	315 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	OR5AC2	Q9NZP5	309 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	MBD2	Q9UBB5	411 aa		11.17	□□□□□ -0.62
ABR-223	ENST00000573895	STRAP	Q9Y3F4	350 aa	Known RBP	11.17	□□□□□ -0.62
ABR-223	ENST00000573895	TEX22	C9J3V5	150 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895		E7EUB6	86 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	SMLR1	H3BR10	107 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	IAPP	P10997	89 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	EGR2	P11161	476 aa	Predicted RBP	11.16	□□□□□ -0.62
ABR-223	ENST00000573895	RAB9A	P51151	201 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	C10orf55	Q5SWW7	151 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	LCNL1	Q6ZST4	164 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	OR2C3	Q8N628	320 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	ZNF491	Q8N8L2	437 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	OR10W1	Q8NGF6	305 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	OR1L6	Q8NGR2	347 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	DCUN1D4	Q92564	292 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	LYRM2	Q9NU23	88 aa	Predicted RBP	11.16	□□□□□ -0.62
ABR-223	ENST00000573895	FBXO7	Q9Y3I1	522 aa		11.16	□□□□□ -0.62
ABR-223	ENST00000573895	FXYD6-FXYD2	A0A087WZ82	144 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895		A0A1B0GW64	132 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	IGLC7	A0M8Q6	106 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	TMEM50A	O95807	157 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	IFNA10	P01566	189 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	OR13C7	P0DN81	318 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	RAB11A	P62491	216 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	EGFEM1P	Q0D2K5	195 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	FHL3	Q13643	280 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	ECSCR	Q19T08	205 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	SPINK9	Q5DT21	86 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	ACOT7L	Q6ZUV0	252 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	TTC9C	Q8N5M4	171 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	OR11H4	Q8NGC9	324 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	GRPEL2	Q8TAA5	225 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	ABHD5	Q8WTS1	349 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	KLK15	Q9H2R5	256 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	TNFSF18	Q9UNG2	199 aa		11.15	□□□□□ -0.62
ABR-223	ENST00000573895	NPIPB5	A8MRT5	1133 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895		I3L521	148 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	CYB5B	O43169	146 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	SOX15	O60248	233 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	CRYGC	P07315	174 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
ABR-223	ENST00000573895	RPL12	P30050	165 aa	Known RBP	11.14	□□□□□ -0.63
ABR-223	ENST00000573895	CAV2	P51636	162 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	WT1-AS	Q06250	92 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	OR2F1	Q13607	317 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	BSX	Q3C1V8	233 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	C2orf83	Q53S99	150 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	SPANXN5	Q5MJ07	72 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	TMEM252	Q8N6L7	170 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	ZNF114	Q8NC26	417 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	SLC24A4	Q8NFF2	622 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	DPF1	Q92782	380 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	AQP10	Q96PS8	301 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	MFF	Q9GZY8	342 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	SLA2	Q9H6Q3	261 aa		11.14	□□□□□ -0.63
ABR-223	ENST00000573895	ZMAT5	Q9UDW3	170 aa	Known RBP	11.14	□□□□□ -0.63
ABR-223	ENST00000573895		A0A0D9SG52	128 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895		H3BUA1	57 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	BRI3	O95415	125 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	CTRB1	P17538	263 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	NPY1R	P25929	384 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	BAX	Q07812	192 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	CTRB2	Q6GPI1	263 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	UNQ5815/PRO19632	Q6UWF5	114 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	TMEM14EP	Q6UXP3	125 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	STX12	Q86Y82	276 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	LFNG	Q8NES3	379 aa		11.13	□□□□□ -0.63

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