RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 ITPR2Q14571 2701 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 A0A087X0M5 115 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 A0A1B0GX30 115 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 REG1AP05451 166 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 ENY2Q9NPA8 101 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 PITPNC1Q9UKF7 332 aa11.32□□□□□ -0.6
TVP23A-207ENST00000573360 IGHV3-21A0A0B4J1V1 117 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 IGHV2-26A0A0B4J1V2 119 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 ZBTB34Q8NCN2 500 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 FAM168AQ92567 244 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 CTDSP1Q9GZU7 261 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 NDUFB4O95168 129 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 HPRT1P00492 218 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 MBP02144 154 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 KRTAP10-9P60411 292 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 PMS2P11Q13670 270 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 ACOT6Q3I5F7 207 aaPredicted RBP11.31□□□□□ -0.6
TVP23A-207ENST00000573360 OR2T10Q8NGZ9 312 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 FBN2P35556 2912 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 TENM4Q6N022 2769 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
TVP23A-207ENST00000573360 CNTFRP26992 372 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 MAS1LP35410 378 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.6
TVP23A-207ENST00000573360 OR4A47Q6IF82 309 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 TMEM14EPQ6UXP3 125 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 ZNF841Q6ZN19 808 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 CYP2G1PQ6ZSU1 146 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
TVP23A-207ENST00000573360 FLYWCH2Q96CP2 140 aaKnown RBP11.31□□□□□ -0.6
TVP23A-207ENST00000573360 RITA1Q96K30 269 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 NPCDR1Q9BY65 106 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
TVP23A-207ENST00000573360 GCN1Q92616 2671 aaKnown RBP11.31□□□□□ -0.6
TVP23A-207ENST00000573360 CLEC2AQ6UVW9 174 aa11.3□□□□□ -0.6
TVP23A-207ENST00000573360 DTX2Q86UW9 622 aa11.3□□□□□ -0.6
TVP23A-207ENST00000573360 CIB3Q96Q77 187 aaPredicted RBP11.3□□□□□ -0.6
TVP23A-207ENST00000573360 HIST1H1BP16401 226 aaKnown RBP11.3□□□□□ -0.6
TVP23A-207ENST00000573360 CLEC7AQ9BXN2 247 aa11.3□□□□□ -0.6
TVP23A-207ENST00000573360 SCGB1D1O95968 90 aa11.3□□□□□ -0.6
TVP23A-207ENST00000573360 ATP5G3P48201 142 aa11.3□□□□□ -0.6
TVP23A-207ENST00000573360 THBS3P49746 956 aa11.3□□□□□ -0.6
TVP23A-207ENST00000573360 KCNIP4Q6PIL6 250 aa11.3□□□□□ -0.6
TVP23A-207ENST00000573360 HSPB7Q9UBY9 170 aa11.3□□□□□ -0.6
TVP23A-207ENST00000573360 NCBP2LA6PVI3 153 aaKnown RBP11.29□□□□□ -0.6
TVP23A-207ENST00000573360 ATP6V1FQ16864 119 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 OR10W1Q8NGF6 305 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 OR1P1Q8NH06 330 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 A0A1B0GV90 55 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 TGOLN2O43493 480 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 GPX4P36969 197 aaPredicted RBP11.29□□□□□ -0.6
TVP23A-207ENST00000573360 DERL1Q9BUN8 251 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 COMMD5Q9GZQ3 224 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 SRD5A3Q9H8P0 318 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 TPSG1Q9NRR2 321 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 CD1BP29016 333 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 PRRX1P54821 245 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 BRD3OSQ6XYD6 125 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 HIPK2Q9H2X6 1198 aa11.29□□□□□ -0.6
TVP23A-207ENST00000573360 IGHV4-30-2A0A087WSY4 118 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 SAA1P0DJI8 122 aaPredicted RBP11.28□□□□□ -0.6
TVP23A-207ENST00000573360 MIC13Q5XKP0 118 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 C19orf35Q6ZS72 473 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 KAAG1Q9UBP8 84 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 TRBV24-1A0A075B6N3 115 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 IGHV4-61A0A0C4DH41 118 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 ZNF705FA8MVS1 300 aaPredicted RBP11.28□□□□□ -0.6
TVP23A-207ENST00000573360 ZNF705DP0CH99 300 aaPredicted RBP11.28□□□□□ -0.6
TVP23A-207ENST00000573360 ZNF705BP0CI00 300 aaPredicted RBP11.28□□□□□ -0.6
TVP23A-207ENST00000573360 RND2P52198 227 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 UBR5O95071 2799 aaPredicted RBP11.28□□□□□ -0.6
TVP23A-207ENST00000573360 MDFIC2A0A1B0GVS7 189 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 HRASP01112 189 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 DDTP30046 118 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 PRSS8Q16651 343 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 MANBALQ9NQG1 85 aa11.28□□□□□ -0.6
TVP23A-207ENST00000573360 TANC2Q9HCD6 1990 aa11.27□□□□□ -0.6
TVP23A-207ENST00000573360 HCP5Q6MZN7 132 aa11.27□□□□□ -0.6
TVP23A-207ENST00000573360 VMO1Q7Z5L0 202 aa11.27□□□□□ -0.6
TVP23A-207ENST00000573360 ZNF439Q8NDP4 499 aa11.27□□□□□ -0.6
TVP23A-207ENST00000573360 CORO2AQ92828 525 aa11.27□□□□□ -0.6
TVP23A-207ENST00000573360 FAM103A1Q9BTL3 118 aaKnown RBP11.27□□□□□ -0.6
TVP23A-207ENST00000573360 TRAPPC1Q9Y5R8 145 aa11.27□□□□□ -0.6
TVP23A-207ENST00000573360 SPINK4O60575 86 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 CNIH1O95406 144 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 IL3RAP26951 378 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 PDLIM4P50479 330 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 MMDQ15546 238 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 TNXAQ16473 311 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 PRDM13Q9H4Q3 707 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 TIMM23O14925 209 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 GATCO43716 136 aaKnown RBP11.27□□□□□ -0.61
TVP23A-207ENST00000573360 AMBPP02760 352 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 TMEM183AQ8IXX5 376 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 C11orf42Q8N5U0 333 aa11.27□□□□□ -0.61
TVP23A-207ENST00000573360 TCF19Q9Y242 345 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms