RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RBMY1EA6NEQ0 496 aaKnown RBP12.97□□□□□ -0.33
SMG6-212ENST00000573153 OR2T8A6NH00 312 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 ZNF701M0R085 212 aaPredicted RBP12.97□□□□□ -0.33
SMG6-212ENST00000573153 NDUFA4O00483 81 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 RBMY1DP0C7P1 496 aaKnown RBP12.97□□□□□ -0.33
SMG6-212ENST00000573153 AKR1C2P52895 323 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 CD81P60033 236 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 IZUMO4Q1ZYL8 232 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 SP6Q3SY56 376 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 ZNF57Q68EA5 555 aaPredicted RBP12.97□□□□□ -0.33
SMG6-212ENST00000573153 FAM219AQ8IW50 185 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 UXS1Q8NBZ7 420 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 GLYATL2Q8WU03 294 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 CHRDL1Q9BU40 450 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 NAA60Q9H7X0 242 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 ZMAT4Q9H898 229 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 HYDINQ4G0P3 5121 aa12.97□□□□□ -0.33
SMG6-212ENST00000573153 TRAV25A0A0B4J276 109 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 TEX13DA0A0J9YY54 714 aaPredicted RBP12.96□□□□□ -0.33
SMG6-212ENST00000573153 FABP12A6NFH5 140 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 CRYM-AS1A6NIL9 109 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 ST8SIA3O43173 380 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 ERHP84090 104 aaKnown RBP12.96□□□□□ -0.33
SMG6-212ENST00000573153 DHODHQ02127 395 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 TRIM16LQ309B1 348 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 DEFB125Q8N687 156 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 OR51S1Q8NGJ8 323 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 RETNQ9HD89 108 aa12.96□□□□□ -0.33
SMG6-212ENST00000573153 IGHV3-21A0A0B4J1V1 117 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 A0A0G2JRQ6 117 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 K7EMT4 169 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 CTSGP08311 255 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 OR5AC1P0C628 307 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 BTNL8Q6UX41 500 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 RBPMSQ93062 196 aaKnown RBP12.95□□□□□ -0.34
SMG6-212ENST00000573153 RRNAD1Q96FB5 475 aaKnown RBP12.95□□□□□ -0.34
SMG6-212ENST00000573153 GALNT14Q96FL9 552 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 HIPK2Q9H2X6 1198 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 DAZ1Q9NQZ3 744 aaKnown RBP12.95□□□□□ -0.34
SMG6-212ENST00000573153 SCP2D1Q9UJQ7 156 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 TMEM56-RWDD3S4R434 201 aa12.95□□□□□ -0.34
SMG6-212ENST00000573153 MFAP4P55083 255 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 BSXQ3C1V8 233 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 SLC35G3Q8N808 338 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 OR52E5Q8NH55 327 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 LHFPL5Q8TAF8 219 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 DEDD2Q8WXF8 326 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 TRIM63Q969Q1 353 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 SCGB3A2Q96PL1 93 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 SPATA25Q9BR10 227 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 V9GYH0 126 aa12.94□□□□□ -0.34
SMG6-212ENST00000573153 TENM2Q9NT68 2774 aa12.93□□□□□ -0.34
SMG6-212ENST00000573153 C15orf62A8K5M9 175 aa12.93□□□□□ -0.34
SMG6-212ENST00000573153 MT-CO2P00403 227 aa12.93□□□□□ -0.34
SMG6-212ENST00000573153 Q56UQ5 140 aa12.93□□□□□ -0.34
SMG6-212ENST00000573153 Q6ZRM9 215 aa12.93□□□□□ -0.34
SMG6-212ENST00000573153 SELENOHQ8IZQ5 122 aaKnown RBP12.93□□□□□ -0.34
SMG6-212ENST00000573153 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
SMG6-212ENST00000573153 MISP3Q96FF7 219 aa12.93□□□□□ -0.34
SMG6-212ENST00000573153 TUBA4BQ9H853 241 aa12.93□□□□□ -0.34
SMG6-212ENST00000573153 CORTO00230 105 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 IFNA17P01571 189 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 SNCAP37840 140 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 SPCS3P61009 180 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 RELQ04864 619 aaPredicted RBP12.92□□□□□ -0.34
SMG6-212ENST00000573153 KLF9Q13886 244 aaPredicted RBP12.92□□□□□ -0.34
SMG6-212ENST00000573153 GUCA2BQ16661 112 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 ANKRD55Q3KP44 614 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 SLC16A13Q7RTY0 426 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 CCDC190Q86UF4 302 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 TMEM230Q96A57 120 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 PDCD10Q9BUL8 212 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
SMG6-212ENST00000573153 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.92□□□□□ -0.34
SMG6-212ENST00000573153 OR11H12B2RN74 326 aa12.91□□□□□ -0.34
SMG6-212ENST00000573153 NUPL2O15504 423 aaKnown RBP12.91□□□□□ -0.34
SMG6-212ENST00000573153 SCAF4O95104 1147 aaKnown RBP12.91□□□□□ -0.34
SMG6-212ENST00000573153 RNASE2P10153 161 aaKnown RBP12.91□□□□□ -0.34
SMG6-212ENST00000573153 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMG6-212ENST00000573153 TMEM187Q14656 261 aa12.91□□□□□ -0.34
SMG6-212ENST00000573153 ZNF79Q15937 498 aa12.91□□□□□ -0.34
SMG6-212ENST00000573153 SPINK9Q5DT21 86 aa12.91□□□□□ -0.34
SMG6-212ENST00000573153 UBAC2Q8NBM4 344 aa12.91□□□□□ -0.34
SMG6-212ENST00000573153 CACFD1Q9UGQ2 172 aa12.91□□□□□ -0.34
SMG6-212ENST00000573153 CCDC160A6NGH7 325 aa12.9□□□□□ -0.34
SMG6-212ENST00000573153 TSPAN4O14817 238 aa12.9□□□□□ -0.34
SMG6-212ENST00000573153 S100A5P33763 92 aa12.9□□□□□ -0.34
SMG6-212ENST00000573153 FAUP35544 74 aaKnown RBP12.9□□□□□ -0.34
SMG6-212ENST00000573153 ETV6P41212 452 aa12.9□□□□□ -0.34
SMG6-212ENST00000573153 AP3S2P59780 193 aa12.9□□□□□ -0.34
SMG6-212ENST00000573153 RNASE11Q8TAA1 199 aaKnown RBP12.9□□□□□ -0.34
SMG6-212ENST00000573153 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
SMG6-212ENST00000573153 KCNIP3Q9Y2W7 256 aa12.9□□□□□ -0.34
SMG6-212ENST00000573153 ALMS1Q8TCU4 4167 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 IGHV3OR16-8A0A075B7F1 116 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 NPBWR1P48145 328 aa12.89□□□□□ -0.35
SMG6-212ENST00000573153 HOXA1P49639 335 aaPredicted RBP12.89□□□□□ -0.35
SMG6-212ENST00000573153 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms