RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 TECRQ9NZ01 308 aaKnown RBP5.62□□□□□ -1.51
NUP88-205ENST00000572809 PRNDQ9UKY0 176 aa5.62□□□□□ -1.51
NUP88-205ENST00000572809 GABARAPH6UMI1 98 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 TRIAP1O43715 76 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 RAB3DO95716 219 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 IGKV1-39P01597 117 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 CD74P04233 296 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 IGKV1D-39P04432 117 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 CBLN1P23435 193 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 GPR183P32249 361 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 PIGPP57054 158 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 TAS2R19P59542 299 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 RND3P61587 244 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 MRPS10P82664 201 aaKnown RBP5.61□□□□□ -1.51
NUP88-205ENST00000572809 SSBP1Q04837 148 aaKnown RBP5.61□□□□□ -1.51
NUP88-205ENST00000572809 STEAP1BQ6NZ63 245 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 Q6ZSN1 163 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 LHFPL1Q86WI0 220 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 LAX1Q8IWV1 398 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 UXS1Q8NBZ7 420 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 OR1L6Q8NGR2 347 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 ZNF502Q8TBZ5 544 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 ZFAND1Q8TCF1 268 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 DYNLRB2Q8TF09 96 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 RAB2BQ8WUD1 216 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 DIRAS2Q96HU8 199 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 BCL7BQ9BQE9 202 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 THAP7Q9BT49 309 aaPredicted RBP5.61□□□□□ -1.51
NUP88-205ENST00000572809 TUBA4BQ9H853 241 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 PALMDQ9NP74 551 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 ZC4H2Q9NQZ6 224 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 TMEM14BQ9NUH8 114 aa5.61□□□□□ -1.51
NUP88-205ENST00000572809 F11RQ9Y624 299 aaKnown RBP5.61□□□□□ -1.51
NUP88-205ENST00000572809 IGHV3-21A0A0B4J1V1 117 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 C3orf85A0A1B0GTC6 90 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 C15orf61A6NNL5 157 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 TGOLN2O43493 480 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 ATG12O94817 140 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 SCAF4O95104 1147 aaKnown RBP5.6□□□□□ -1.51
NUP88-205ENST00000572809 EDN2P20800 178 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 RPL5P46777 297 aaKnown RBP5.6□□□□□ -1.51
NUP88-205ENST00000572809 MFAP2P55001 183 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 ELLP55199 621 aaPredicted RBP5.6□□□□□ -1.51
NUP88-205ENST00000572809 HSPE1P61604 102 aaKnown RBP5.6□□□□□ -1.51
NUP88-205ENST00000572809 IL18Q14116 193 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 GUCA2BQ16661 112 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 SCGB2B2Q4G0G5 96 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 CCDC71LQ8N9Z2 235 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 OR4D10Q8NGI6 311 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 DYNC2LI1Q8TCX1 351 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 SCARB1Q8WTV0 552 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 MRGPRFQ96AM1 343 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 RCHY1Q96PM5 261 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 ATP6V0BQ99437 205 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 NEU1Q99519 415 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 NEURL2Q9BR09 285 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 TM2D3Q9BRN9 247 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 SLC2A8Q9NY64 477 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 MRPL27Q9P0M9 148 aaKnown RBP5.6□□□□□ -1.51
NUP88-205ENST00000572809 COPZ2Q9P299 210 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 RABL2AQ9UBK7 228 aaPredicted RBP5.6□□□□□ -1.51
NUP88-205ENST00000572809 RABL2BQ9UNT1 228 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 DNAH9Q9NYC9 4486 aa5.6□□□□□ -1.51
NUP88-205ENST00000572809 IGHV3-35A0A0C4DH35 117 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 TMEM213A2RRL7 107 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 OR2T8A6NH00 312 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 A8MWP6 167 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 DISC1C4P0D8 188 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 CTDSPLO15194 276 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 NOL3O60936 208 aaKnown RBP5.59□□□□□ -1.51
NUP88-205ENST00000572809 CTSDP07339 412 aaPredicted RBP5.59□□□□□ -1.51
NUP88-205ENST00000572809 CD7P09564 240 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 C8orf88P0DMB2 117 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 PPP5CP53041 499 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 CD81P60033 236 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 ERHP84090 104 aaKnown RBP5.59□□□□□ -1.51
NUP88-205ENST00000572809 PRCDQ00LT1 54 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 MEF2DQ14814 521 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 HAGHQ16775 308 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 IZUMO4Q1ZYL8 232 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 SP6Q3SY56 376 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 ZNF57Q68EA5 555 aaPredicted RBP5.59□□□□□ -1.51
NUP88-205ENST00000572809 SPSB3Q6PJ21 355 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 UNQ9165/PRO28630Q6UXU0 137 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 Q6ZRM9 215 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 UBAC2Q8NBM4 344 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 OR1P1Q8NH06 330 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 MARCH1Q8TCQ1 289 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 SMIM4Q8WVI0 70 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 CACNG8Q8WXS5 425 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 MARC2Q969Z3 335 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 BSCL2Q96G97 398 aaPredicted RBP5.59□□□□□ -1.51
NUP88-205ENST00000572809 TP53RKQ96S44 253 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 ZNF436Q9C0F3 470 aaPredicted RBP5.59□□□□□ -1.51
NUP88-205ENST00000572809 C6orf62Q9GZU0 229 aaPredicted RBP5.59□□□□□ -1.51
NUP88-205ENST00000572809 C21orf62Q9NYP8 219 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 CCDC59Q9P031 241 aaKnown RBP5.59□□□□□ -1.51
NUP88-205ENST00000572809 MLXQ9UH92 298 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 UFC1Q9Y3C8 167 aa5.59□□□□□ -1.51
NUP88-205ENST00000572809 SELENOKQ9Y6D0 94 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms