RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ZNF286AQ9HBT8 521 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 TAS2R8Q9NYW2 309 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 TP73-AS1Q9UF72 201 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 SNX12Q9UMY4 172 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 MPC1Q9Y5U8 109 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 IER3IP1Q9Y5U9 82 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 DSPPQ9NZW4 1301 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 CARMIL3Q8ND23 1372 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 AKAP12Q02952 1782 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 KIAA1107Q9UPP5 1409 aa3.61□□□□□ -1.83
TOPBP1-210ENST00000572787 MIA3Q5JRA6 1907 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 CEP170Q5SW79 1584 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 ARHGEF17Q96PE2 2063 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 A0A087X002 238 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 IGHV7-4-1A0A0J9YVY3 117 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 OR2T8A6NH00 312 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 C1orf196B1AJZ1 125 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 SRRM5B3KS81 715 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 UBFD1O14562 309 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 SOCS1O15524 211 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 NDUFB3O43676 98 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 NAPSAO96009 420 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 PRM2P04554 102 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF688P0C7X2 276 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 SRP14P37108 136 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 CXCL5P42830 114 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 FOXA3P55318 350 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 YPEL3P61236 119 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 UBE2BP63146 152 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 BSPH1Q075Z2 132 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 HES1Q14469 280 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 SP6Q3SY56 376 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 AADACL3Q5VUY0 350 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 SSX8Q7RTT4 187 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 APCDD1LQ8NCL9 501 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 OR4A5Q8NH83 315 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 NAT14Q8WUY8 206 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 NAA38Q9BRA0 125 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 MIEN1Q9BRT3 115 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 ADAT1Q9BUB4 502 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 DUSP21Q9H596 190 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 FUT9Q9Y231 359 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 KLK5Q9Y337 293 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 RNF11Q9Y3C5 154 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 CSAG2Q9Y5P2 127 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 A2ML1A8K2U0 1454 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 ADGRL2O95490 1459 aa3.6□□□□□ -1.83
TOPBP1-210ENST00000572787 NUP210Q8TEM1 1887 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 TRAV27A0A087WT01 109 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 IGKV1-12A0A0C4DH73 117 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 ODAMA1E959 279 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 C7orf71A4D174 169 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 A8MWV9 139 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 FNDC10F2Z333 226 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 H3BMG7 143 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 C19orf84I3L1E1 186 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 TMEM256-PLSCR3K7ERE1 68 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 TNFP01375 233 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 IGKV1D-12P01611 117 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 UBE2AP49459 152 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 AKR1C2P52895 323 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 S100A10P60903 97 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 GNB2P62879 340 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 EIF5AP63241 154 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 KRTAP1-1Q07627 177 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 PHF5AQ7RTV0 110 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 SMIM29Q86T20 159 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 RPS19BP1Q86WX3 136 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF440Q8IYI8 595 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 MAL2Q969L2 176 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 YPEL2Q96QA6 119 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 DERL1Q9BUN8 251 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 MRPL32Q9BYC8 188 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 C8orf17Q9NRJ1 99 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 RPRMQ9NS64 109 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 IL36BQ9NZH7 164 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF581Q9P0T4 197 aa3.59□□□□□ -1.83
TOPBP1-210ENST00000572787 A0A087X0T9 212 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 A0A0G2JMM0 328 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 FAM236AA0A1B0GUQ0 79 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 FAM236BA0A1B0GV22 79 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 A0A1W2PPB8 328 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF727A8MUV8 499 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 KIR3DP1A8MWS1 328 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 H3BQF6 201 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 BUB1B-PAK6H3BSN5 160 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF324O75467 553 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 IGLV1-44P01699 117 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 CSN1S1P47710 185 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 LINC00205P59089 165 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 TMEM258P61165 79 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 RPL30P62888 115 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 CGB2Q6NT52 195 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 C22orf39Q6P5X5 142 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 Q8N1X5 172 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 TEX29Q8N6K0 151 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 Q8N7P7 452 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 TMEM158Q8WZ71 300 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 ELSPBP1Q96BH3 223 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 B9D2Q9BPU9 175 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms