RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 APOC3P02656 99 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 IGHV4-31P0DP07 118 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 ZNF726P1Q15940 193 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 MARC2Q969Z3 335 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 FNDC4Q9H6D8 234 aaPredicted RBP8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 TMEM249Q2WGJ8 235 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 CENPVQ7Z7K6 275 aaPredicted RBP8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 TMEM231Q9H6L2 316 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 LSM4Q9Y4Z0 139 aaKnown RBP8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 TIMM9Q9Y5J7 89 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 DMRT1Q9Y5R6 373 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 TLN2Q9Y4G6 2542 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 IGKV1OR2-108A0A075B7D4 117 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 FAM106CPP0CH98 169 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 BRS3P32247 399 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 FXYD3Q14802 87 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 Q8N9W7 124 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
PDXDC1-216ENST00000569715 CCL20P78556 96 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 CD69Q07108 199 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 GAMTQ14353 236 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 GCSAMLQ5JQS6 135 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 TMEM219Q86XT9 240 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 WFDC11Q8NEX6 87 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 OR2T6Q8NHC8 308 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 LINC00052Q96N35 136 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 GGTLC1Q9BX51 225 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 MRPL36Q9P0J6 103 aaKnown RBP8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 FAM96BQ9Y3D0 163 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 SH2D7A6NKC9 451 aaPredicted RBP8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 CX3CL1P78423 397 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 SERF2P84101 59 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 FFAR4Q5NUL3 377 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 SPSB3Q6PJ21 355 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 EIF4E3Q8N5X7 224 aaKnown RBP8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 PIFOQ8TCI5 191 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 NPVFQ9HCQ7 196 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 TSPAN15O95858 294 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 TMEM41BQ5BJD5 291 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 SLC16A13Q7RTY0 426 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 ABHD5Q8WTS1 349 aa8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 RCC1LQ96I51 464 aaKnown RBP8.67□□□□□ -1.02
PDXDC1-216ENST00000569715 IGHV3-21A0A0B4J1V1 117 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 GATA3P23771 443 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 ATP5IP56385 69 aaPredicted RBP8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 MIC13Q5XKP0 118 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 RPP25LQ8N5L8 163 aaKnown RBP8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 ZNF709Q8N972 641 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 ZNF114Q8NC26 417 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 HSPB9Q9BQS6 159 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 MDFIC2A0A1B0GVS7 189 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 OPRK1P41145 380 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 IL34Q6ZMJ4 242 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 CIARTQ8N365 385 aaPredicted RBP8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 SFT2D1Q8WV19 159 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 MISP3Q96FF7 219 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 SAV1Q9H4B6 383 aaPredicted RBP8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 ASPHD1Q5U4P2 390 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 TEPPQ6URK8 271 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 BPIFCQ8NFQ6 507 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 ACY3Q96HD9 319 aa8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 F11RQ9Y624 299 aaKnown RBP8.66□□□□□ -1.02
PDXDC1-216ENST00000569715 IGHV7-81A0A0B4J1V7 117 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 RAB19A4D1S5 217 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 HMGB3O15347 200 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 YIF1AO95070 293 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 SUB1P53999 127 aaKnown RBP eCLIP8.65□□□□□ -1.029e-9■■■■■ 41.4
PDXDC1-216ENST00000569715 FGF8P55075 233 aaPredicted RBP8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 PVRIGQ6DKI7 326 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 PRSS57Q6UWY2 283 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 C22orf15Q8WYQ4 148 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 ARPC1AQ92747 370 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 SLC25A22Q9H936 323 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 C17orf112F2Z3M2 114 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 MPDU1O75352 247 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 LCN15Q6UWW0 184 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 ZNF562Q6V9R5 426 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 SSX3Q99909 188 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 PXMP4Q9Y6I8 212 aa8.65□□□□□ -1.02
PDXDC1-216ENST00000569715 GATA2P23769 480 aaPredicted RBP8.65□□□□□ -1.03
PDXDC1-216ENST00000569715 DPPA3Q6W0C5 159 aa8.65□□□□□ -1.03
PDXDC1-216ENST00000569715 TMEM144Q7Z5S9 345 aa8.65□□□□□ -1.03
PDXDC1-216ENST00000569715 BCL6BQ8N143 479 aaPredicted RBP8.65□□□□□ -1.03
PDXDC1-216ENST00000569715 OR1P1Q8NH06 330 aa8.65□□□□□ -1.03
PDXDC1-216ENST00000569715 SCRT1Q9BWW7 348 aa8.65□□□□□ -1.03
PDXDC1-216ENST00000569715 MEGF9Q9H1U4 602 aa8.65□□□□□ -1.03
PDXDC1-216ENST00000569715 C9JQL5 133 aa8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 FNDC10F2Z333 226 aa8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 MRPL41Q8IXM3 137 aaKnown RBP8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 OR10G4Q8NGN3 311 aa8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 OR10G9Q8NGN4 311 aa8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 OR10G7Q8NGN6 311 aa8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 CTRB1P17538 263 aa8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 RPL35P42766 123 aaKnown RBP8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 LY6EQ16553 131 aa8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 CTRB2Q6GPI1 263 aa8.64□□□□□ -1.03
PDXDC1-216ENST00000569715 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms