RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SHISA2Q6UWI4 295 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 C3orf56Q8N813 242 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 ZNF491Q8N8L2 437 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 CITED1Q99966 193 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 FBXL7Q9UJT9 491 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 IAPPP10997 89 aa18.26■□□□□ 0.51
RAB40C-212ENST00000569575 PRSS54Q6PEW0 395 aa18.26■□□□□ 0.51
RAB40C-212ENST00000569575 NDUFA11Q86Y39 141 aa18.26■□□□□ 0.51
RAB40C-212ENST00000569575 CACNG8Q8WXS5 425 aa18.26■□□□□ 0.51
RAB40C-212ENST00000569575 MS4A10Q96PG2 267 aa18.26■□□□□ 0.51
RAB40C-212ENST00000569575 TXN2Q99757 166 aa18.26■□□□□ 0.51
RAB40C-212ENST00000569575 KLK15Q9H2R5 256 aa18.26■□□□□ 0.51
RAB40C-212ENST00000569575 TRBV7-1A0A0A6YYK4 115 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 FCGR2BP31994 310 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-212ENST00000569575 GPX4P36969 197 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-212ENST00000569575 P2RY1P47900 373 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 PAX9P55771 341 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 RUNX1Q01196 453 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 KIAA0141Q14154 515 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-212ENST00000569575 TCTEX1D4Q5JR98 221 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 SPANXN5Q5MJ07 72 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 C10orf99Q6UWK7 81 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 THAP6Q8TBB0 222 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 C11orf1Q9H5F2 150 aa18.25■□□□□ 0.51
RAB40C-212ENST00000569575 LYRM2Q9NU23 88 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-212ENST00000569575 OR2J3O76001 311 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 IFNA4P05014 189 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 RPLP1P05386 114 aaKnown RBP18.24■□□□□ 0.51
RAB40C-212ENST00000569575 OR8U8P0C7N1 319 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 CD28P10747 220 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 SLC25A4P12235 298 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 LYL1P12980 280 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 C15orf32Q32M92 178 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 TMEM14EPQ6UXP3 125 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 EEF1AKMT3Q96AZ1 226 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 SLC25A31Q9H0C2 315 aa18.24■□□□□ 0.51
RAB40C-212ENST00000569575 C15orf62A8K5M9 175 aa18.23■□□□□ 0.51
RAB40C-212ENST00000569575 BCAP31P51572 246 aa18.23■□□□□ 0.51
RAB40C-212ENST00000569575 MFAP2P55001 183 aa18.23■□□□□ 0.51
RAB40C-212ENST00000569575 C4orf3Q8WVX3 66 aa18.23■□□□□ 0.51
RAB40C-212ENST00000569575 DMRT1Q9Y5R6 373 aa18.23■□□□□ 0.51
RAB40C-212ENST00000569575 I3L2K1 104 aa18.22■□□□□ 0.51
RAB40C-212ENST00000569575 TMEM50AO95807 157 aa18.22■□□□□ 0.51
RAB40C-212ENST00000569575 PRH1P02810 166 aa18.22■□□□□ 0.51
RAB40C-212ENST00000569575 LRRC37A5PQ49AS3 106 aa18.22■□□□□ 0.51
RAB40C-212ENST00000569575 ZNF343Q6P1L6 599 aa18.22■□□□□ 0.51
RAB40C-212ENST00000569575 ETV3LQ6ZN32 361 aa18.22■□□□□ 0.51
RAB40C-212ENST00000569575 MISP3Q96FF7 219 aa18.22■□□□□ 0.51
RAB40C-212ENST00000569575 CITED2Q99967 270 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-212ENST00000569575 GGACTQ9BVM4 153 aa18.22■□□□□ 0.51
RAB40C-212ENST00000569575 FNDC10F2Z333 226 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 SCGB2A1O75556 95 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 NDUFB8O95169 186 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 OPRK1P41145 380 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 C11orf87Q6NUJ2 197 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 OR10P1Q8NGE3 313 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 OR2T35Q8NGX2 323 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 TMEM170AQ8WVE7 144 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 PINX1Q96BK5 328 aaKnown RBP18.21■□□□□ 0.51
RAB40C-212ENST00000569575 RNF126Q9BV68 326 aa18.21■□□□□ 0.51
RAB40C-212ENST00000569575 K7EIM0 57 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 MT-CO2P00403 227 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 LGALS1P09382 135 aaKnown RBP18.2■□□□□ 0.5
RAB40C-212ENST00000569575 NPBWR1P48145 328 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 CAV2P51636 162 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 MFAP4P55083 255 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 KRTAP10-3P60369 221 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 CD69Q07108 199 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 BAXQ07812 192 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 STX12Q86Y82 276 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 SCARB1Q8WTV0 552 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 OR4C12Q96R67 309 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 C21orf62Q9NYP8 219 aa18.2■□□□□ 0.5
RAB40C-212ENST00000569575 COL6A5A8TX70 2615 aa18.19■□□□□ 0.5
RAB40C-212ENST00000569575 H0YIZ8 118 aa18.19■□□□□ 0.5
RAB40C-212ENST00000569575 SULT1A1P50225 295 aa18.19■□□□□ 0.5
RAB40C-212ENST00000569575 HBG1P69891 147 aa18.19■□□□□ 0.5
RAB40C-212ENST00000569575 HBG2P69892 147 aa18.19■□□□□ 0.5
RAB40C-212ENST00000569575 DCUN1D4Q92564 292 aa18.19■□□□□ 0.5
RAB40C-212ENST00000569575 RANGRFQ9HD47 186 aaPredicted RBP18.19■□□□□ 0.5
RAB40C-212ENST00000569575 TRAV30A0A087WSZ9 112 aa18.18■□□□□ 0.5
RAB40C-212ENST00000569575 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.18■□□□□ 0.5
RAB40C-212ENST00000569575 KHDC1LQ5JSQ8 128 aa18.18■□□□□ 0.5
RAB40C-212ENST00000569575 SPSB3Q6PJ21 355 aa18.18■□□□□ 0.5
RAB40C-212ENST00000569575 TMEM252Q8N6L7 170 aa18.18■□□□□ 0.5
RAB40C-212ENST00000569575 TMEM116Q8NCL8 245 aa18.18■□□□□ 0.5
RAB40C-212ENST00000569575 ZNF502Q8TBZ5 544 aa18.18■□□□□ 0.5
RAB40C-212ENST00000569575 WDR89Q96FK6 387 aaPredicted RBP18.18■□□□□ 0.5
RAB40C-212ENST00000569575 PAIP2BQ9ULR5 123 aaKnown RBP18.18■□□□□ 0.5
RAB40C-212ENST00000569575 H3BP45 60 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 I3L521 148 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 CCNKO75909 580 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 S100A11P31949 105 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 NUP62P37198 522 aaPredicted RBP18.17■□□□□ 0.5
RAB40C-212ENST00000569575 DLK1P80370 383 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 ATP6V1FQ16864 119 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 C19orf35Q6ZS72 473 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 TCTE3Q8IZS6 198 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 OR4X1Q8NH49 305 aa18.17■□□□□ 0.5
RAB40C-212ENST00000569575 SPATA3Q8NHX4 192 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms