RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	GGH	Q92820	318 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	ATP6V1G3	Q96LB4	118 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	CABLES2	Q9BTV7	478 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	SEPSECS	Q9HD40	501 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	HEYL	Q9NQ87	328 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	PLEKHJ1	Q9NW61	149 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	BET1L	Q9NYM9	111 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	F11R	Q9Y624	299 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-218	ENST00000569440		V9GYY5	206 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-218	ENST00000569440		A0A0A6YYD4	124 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440		A0A1W2PS18	150 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	SAC3D1	A6NKF1	404 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	MARCH11	A6NNE9	402 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440		F5H697	171 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440		H3BNG1	76 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440		I3L2K1	104 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	BET1	O15155	118 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	FABP7	O15540	132 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	RGS10	O43665	173 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	IGLV2-14	P01704	120 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	PRM2	P04554	102 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	FGF2	P09038	288 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	OR13C7	P0DN81	318 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	M6PR	P20645	277 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	CRYBB3	P26998	211 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	P2RY1	P47900	373 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	GBX2	P52951	348 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	TAS2R43	P59537	309 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	MS4A2	Q01362	244 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	DHRS2	Q13268	280 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	RCN1	Q15293	331 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	OR2B11	Q5JQS5	317 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	GDF5OS	Q5U4N7	250 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440		Q6ZRU5	148 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	LHFPL3	Q86UP9	236 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	DHFR2	Q86XF0	187 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	ADGRG5	Q8IZF4	528 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	OR4S2	Q8NH73	311 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	OR10J5	Q8NHC4	309 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	NRBF2	Q96F24	287 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	MRPL48	Q96GC5	212 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	QTRT1	Q9BXR0	403 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	WDR12	Q9GZL7	423 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	C12orf4	Q9NQ89	552 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	MRPS7	Q9Y2R9	242 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	PRELID3B	Q9Y3B1	194 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	FSIP2	Q5CZC0	6907 aa		4.14	□□□□□ -1.75
BBS4-218	ENST00000569440	TRBV5-5	A0A0J9YX44	114 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440		A0A1B0GU03	582 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	FAM90A26	D6RGX4	464 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	UPK2	O00526	184 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	EBAG9	O00559	213 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	HRAS	P01112	189 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	IGKV3-20	P01619	116 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	NPPC	P23582	126 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	TSPO	P30536	169 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	NKX2-1	P43699	371 aa	Predicted RBP	4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	MFAP4	P55083	255 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	SNRPD3	P62318	126 aa	Known RBP	4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	BLOC1S1	P78537	153 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	TIMM50	Q3ZCQ8	353 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	CCDC58	Q4VC31	144 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	XAF1	Q6GPH4	301 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	THOC7	Q6I9Y2	204 aa	Known RBP	4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	KCTD9	Q7L273	389 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	OR4C16	Q8NGL9	310 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440		Q96MT0	163 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	MYCBP	Q99417	103 aa	Predicted RBP	4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	C7orf50	Q9BRJ6	194 aa	Known RBP	4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	CHAC1	Q9BUX1	264 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	COMMD5	Q9GZQ3	224 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	SLC35B3	Q9H1N7	401 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	ZNF446	Q9NWS9	450 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	MSRB1	Q9NZV6	116 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	CKLF	Q9UBR5	152 aa		4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	RBM7	Q9Y580	266 aa	Known RBP	4.13	□□□□□ -1.75
BBS4-218	ENST00000569440	TRGV11	A0A075B6L2	103 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	TRAV9-2	A0A087WT02	112 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440		A0A0J9YY99	117 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	TEX50	A0A1B0GTY4	177 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	ZNF701	M0R085	212 aa	Predicted RBP	4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	SOCS1	O15524	211 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	NXPH4	O95158	308 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	IGLV2-8	P01709	118 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	UBB	P0CG47	229 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	TRAPPC2	P0DI81	140 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	TRAPPC2B	P0DI82	140 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	CD37	P11049	281 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	DCK	P27707	260 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	POLR2I	P36954	125 aa	Known RBP	4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	PTTG1IP	P53801	180 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	TMEM50B	P56557	158 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	DEFB1	P60022	68 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	RPS11	P62280	158 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	QRFP	P83859	136 aa		4.12	□□□□□ -1.75
BBS4-218	ENST00000569440	UNC119	Q13432	240 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms