RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CHRNB4P30926 498 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 HSPE1P61604 102 aaKnown RBP7.16□□□□□ -1.26
LINC00558-201ENST00000569422 GNB1P62873 340 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 LYPD2Q6UXB3 125 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 ZNF114Q8NC26 417 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 OR4P4Q8NGL7 312 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 ATRXP46100 2492 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 HCFC1P51610 2035 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 IGHV3-72A0A0B4J1Y9 119 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 PPP5D1E7EU14 171 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 IL6RP08887 468 aaPredicted RBP7.16□□□□□ -1.26
LINC00558-201ENST00000569422 CGB3P0DN86 165 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 CGB7P0DN87 165 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 CDX1P47902 265 aaPredicted RBP7.16□□□□□ -1.26
LINC00558-201ENST00000569422 THBS3P49746 956 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 PRSS8Q16651 343 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 PYY3Q5JQD4 70 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 FAM78BQ5VT40 261 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 ZNF788Q6ZQV5 615 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 STPG3Q8N7X2 389 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 DDB2Q92466 427 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 ASCL2Q99929 193 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 PLEKHA3Q9HB20 300 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 NPVFQ9HCQ7 196 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 TACC2O95359 2948 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 SCO2A0A1W2PP80 73 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 hADV38S2A0JD32 116 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 LYNX1G3V0Z9 82 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 TMEM250H0YL14 139 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 FAM87AP0C7U9 286 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 LYNX1P0DP58 116 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 CRYBA4P53673 196 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 VWC2Q2TAL6 325 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 TEPPQ6URK8 271 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
LINC00558-201ENST00000569422 DYNLRB1Q9NP97 96 aa7.16□□□□□ -1.26
LINC00558-201ENST00000569422 C17orf100A8MU93 164 aa7.15□□□□□ -1.26
LINC00558-201ENST00000569422 HRASP01112 189 aa7.15□□□□□ -1.26
LINC00558-201ENST00000569422 OR10X1Q8NGY0 326 aa7.15□□□□□ -1.26
LINC00558-201ENST00000569422 OR4X1Q8NH49 305 aa7.15□□□□□ -1.26
LINC00558-201ENST00000569422 ATG101Q9BSB4 218 aa7.15□□□□□ -1.26
LINC00558-201ENST00000569422 FUT9Q9Y231 359 aa7.15□□□□□ -1.26
LINC00558-201ENST00000569422 NKX6-3A6NJ46 265 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 ENSAO43768 121 aaKnown RBP7.15□□□□□ -1.27
LINC00558-201ENST00000569422 OR10J4P0C629 311 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 SAA1P0DJI8 122 aaPredicted RBP7.15□□□□□ -1.27
LINC00558-201ENST00000569422 RTL8BQ17RB0 113 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 CR1LQ2VPA4 569 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 C10orf55Q5SWW7 151 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 C1orf159Q96HA4 380 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 ACY3Q96HD9 319 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 HARBI1Q96MB7 349 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 RPUSD1Q9UJJ7 312 aaKnown RBP7.15□□□□□ -1.27
LINC00558-201ENST00000569422 RALYQ9UKM9 306 aaKnown RBP7.15□□□□□ -1.27
LINC00558-201ENST00000569422 CSMD1Q96PZ7 3565 aa7.15□□□□□ -1.27
LINC00558-201ENST00000569422 RBFOX2O43251 390 aaKnown RBP eCLIP7.14□□□□□ -1.27
LINC00558-201ENST00000569422 THBDP07204 575 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 KIR2DS2P43631 304 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 RND2P52198 227 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 EFNB3Q15768 340 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 CTDSP1Q9GZU7 261 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 YTHDF2Q9Y5A9 579 aaKnown RBP7.14□□□□□ -1.27
LINC00558-201ENST00000569422 ABCA1O95477 2261 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 PPIAL4EA0A075B759 164 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 TRGV8A0A0C4DH27 118 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 A0A1B0GV72 72 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 PPIAL4DF5H284 164 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 SNAI2O43623 268 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 REG1AP05451 166 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 PFN1P07737 140 aaKnown RBP7.14□□□□□ -1.27
LINC00558-201ENST00000569422 PPIAL4FP0DN26 164 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 OPRK1P41145 380 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 PAX5Q02548 391 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 TMEM200BQ69YZ2 307 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 MIR17HGQ75NE6 70 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 Q8NA96 180 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 TMEM14BQ9NUH8 114 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 PPIAL4AQ9Y536 164 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 LRBAP50851 2863 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 PRSS46E5RG02 174 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 E7EUB6 86 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 OR7C2O60412 319 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 RAB31Q13636 194 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 ZNF439Q8NDP4 499 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 OR52E5Q8NH55 327 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 ZNF714Q96N38 554 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 COMMD5Q9GZQ3 224 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 RAB9BQ9NP90 201 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 TMEM242Q9NWH2 141 aa7.14□□□□□ -1.27
LINC00558-201ENST00000569422 IGHV3-21A0A0B4J1V1 117 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 TEX50A0A1B0GTY4 177 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 SIVA1O15304 175 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 SPINK4O60575 86 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 FCN3O75636 299 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 OR10J1P30954 320 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 PSG5Q15238 335 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 ASPHD1Q5U4P2 390 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 UNQ6494/PRO21346Q6UXR6 183 aa7.13□□□□□ -1.27
LINC00558-201ENST00000569422 SLC25A48Q6ZT89 311 aaKnown RBP7.13□□□□□ -1.27
LINC00558-201ENST00000569422 ASCL5Q7RTU5 278 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms