RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 SPSB3Q6PJ21 355 aa9.94□□□□□ -0.82
CLK3-224ENST00000568605 PLET1Q6UQ28 207 aa9.94□□□□□ -0.82
CLK3-224ENST00000568605 LRTM2Q8N967 370 aa9.94□□□□□ -0.82
CLK3-224ENST00000568605 GPR146Q96CH1 333 aa9.94□□□□□ -0.82
CLK3-224ENST00000568605 PALMDQ9NP74 551 aa9.94□□□□□ -0.82
CLK3-224ENST00000568605 HEYLQ9NQ87 328 aaPredicted RBP9.94□□□□□ -0.82
CLK3-224ENST00000568605 PRR13Q9NZ81 148 aa9.94□□□□□ -0.82
CLK3-224ENST00000568605 TMED3Q9Y3Q3 217 aa9.94□□□□□ -0.82
CLK3-224ENST00000568605 CEBPZOSA8MTT3 80 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 CLEC3BP05452 202 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 HTR2BP41595 481 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 MFAP2P55001 183 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 Q56UQ5 140 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 NMSQ5H8A3 153 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 LYZL2Q7Z4W2 148 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 NOXA1Q86UR1 476 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 GPHB5Q86YW7 130 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 UBAC2Q8NBM4 344 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 OR1S1Q8NH92 325 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 COQ8AQ8NI60 647 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 SCARB1Q8WTV0 552 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 PINX1Q96BK5 328 aaKnown RBP9.93□□□□□ -0.82
CLK3-224ENST00000568605 HIPK2Q9H2X6 1198 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 SIGLEC8Q9NYZ4 499 aa9.93□□□□□ -0.82
CLK3-224ENST00000568605 A0A1B0GU03 582 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 OR2T8A6NH00 312 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 A8MWP6 167 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 K7EIM0 57 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 IGLV1-51P01701 117 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 SLC25A6P12236 298 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 BTCP35070 178 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 MFAP4P55083 255 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 C4orf46Q504U0 113 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 LCN12Q6JVE5 192 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 MZT2BQ6NZ67 158 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 Q6ZRM9 215 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 SLC24A4Q8NFF2 622 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 DYNLRB2Q8TF09 96 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 TXN2Q99757 166 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 C20orf85Q9H1P6 137 aa9.92□□□□□ -0.82
CLK3-224ENST00000568605 RPS10-NUDT3A0A1W2PQS6 291 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 ZNF320A2RRD8 509 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 NUPL2O15504 423 aaKnown RBP9.91□□□□□ -0.82
CLK3-224ENST00000568605 GNG7O60262 68 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 OR2C1O95371 312 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 MT-CO2P00403 227 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 OR4E1P0C645 316 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 RNASE2P10153 161 aaKnown RBP9.91□□□□□ -0.82
CLK3-224ENST00000568605 FCGR2BP31994 310 aaPredicted RBP9.91□□□□□ -0.82
CLK3-224ENST00000568605 OPRK1P41145 380 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 RELQ04864 619 aaPredicted RBP9.91□□□□□ -0.82
CLK3-224ENST00000568605 TNFRSF9Q07011 255 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 DHRS2Q13268 280 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 LYG2Q86SG7 212 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 OR2K2Q8NGT1 345 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 PRR25Q96S07 402 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 UFC1Q9Y3C8 167 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 DNAH3Q8TD57 4116 aa9.91□□□□□ -0.82
CLK3-224ENST00000568605 PRKDCP78527 4128 aaKnown RBP9.9□□□□□ -0.82
CLK3-224ENST00000568605 IGHV3-21A0A0B4J1V1 117 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 WI2-2373I1.2A0A1W2PRP0 233 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 C9orf170A2RU37 121 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 FAM90A26D6RGX4 464 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 I3L2K1 104 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 K7EIL1 84 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 MED6O75586 246 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 NXPH3O95157 252 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 IFNA21P01568 189 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 CSN3P07498 182 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 GP9P14770 177 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 NPBWR1P48145 328 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 ELLP55199 621 aaPredicted RBP9.9□□□□□ -0.82
CLK3-224ENST00000568605 BSXQ3C1V8 233 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 ANKRD55Q3KP44 614 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 DUSP18Q8NEJ0 188 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 DTD1Q8TEA8 209 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 TMEM190Q8WZ59 177 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 MARC2Q969Z3 335 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 ZC4H2Q9NQZ6 224 aa9.9□□□□□ -0.82
CLK3-224ENST00000568605 FAM240BA0A1B0GVZ2 78 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 C2orf70A6NJV1 201 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 NDUFA4O00483 81 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 PLA2G10O15496 165 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 HOXB5P09067 269 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 SPNP16150 400 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 ANXA7P20073 488 aaKnown RBP9.89□□□□□ -0.83
CLK3-224ENST00000568605 NPY1RP25929 384 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 C2orf83Q53S99 150 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 ENKURQ8TC29 256 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 RNASEH2CQ8TDP1 164 aaKnown RBP9.89□□□□□ -0.83
CLK3-224ENST00000568605 ZNF436Q9C0F3 470 aaPredicted RBP9.89□□□□□ -0.83
CLK3-224ENST00000568605 NUDT15Q9NV35 164 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 TECRQ9NZ01 308 aaKnown RBP9.89□□□□□ -0.83
CLK3-224ENST00000568605 FLVCR2Q9UPI3 526 aa9.89□□□□□ -0.83
CLK3-224ENST00000568605 UPK1BO75841 260 aa9.88□□□□□ -0.83
CLK3-224ENST00000568605 IFNA10P01566 189 aa9.88□□□□□ -0.83
CLK3-224ENST00000568605 TCRBP04435 133 aa9.88□□□□□ -0.83
CLK3-224ENST00000568605 ATP5IP56385 69 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms