RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 TRAV14DV4A0A0A6YYC5 116 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 TRBV9A0A0B4J1U6 114 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 H0YIZ8 118 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 H3BUA1 57 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 DEDDO75618 318 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 MPC2O95563 127 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 DEFA4P12838 97 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 NPY1RP25929 384 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 FOXE3Q13461 319 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 C2orf83Q53S99 150 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 AWAT1Q58HT5 328 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 Q5BKY6 102 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 TCTEX1D4Q5JR98 221 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 TEX38Q6PEX7 206 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 COMMD1Q8N668 190 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 RNF152Q8N8N0 203 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 OR5AU1Q8NGC0 362 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 MYOZ3Q8TDC0 251 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 TMEM158Q8WZ71 300 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 OR4C12Q96R67 309 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 RNF126Q9BV68 326 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 KLK15Q9H2R5 256 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 PSENENQ9NZ42 101 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 OR5AC2Q9NZP5 309 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 U3KQ87 197 aa6.59□□□□□ -1.35
SF3B3-212ENST00000568539 C15orf62A8K5M9 175 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 G3V3Q6 166 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 H3BP45 60 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 L7N2F9 121 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 TSC22D2O75157 780 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 IFNA10P01566 189 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 RLN2P04090 185 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 ELANEP08246 267 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 PET100P0DJ07 73 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 PF4V1P10720 104 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 LYL1P12980 280 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 HIST1H1BP16401 226 aaKnown RBP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 PVALBP20472 110 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 RAB9AP51151 201 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 SUB1P53999 127 aaKnown RBP eCLIP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 ATP5IP56385 69 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 KRTAP10-3P60369 221 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 RPL23AP62750 156 aaKnown RBP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 VAMP2P63027 116 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 RPP30P78346 268 aaKnown RBP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 RHOGP84095 191 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 FGL1Q08830 312 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 KIAA0141Q14154 515 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 SPANXN5Q5MJ07 72 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 SLC25A24Q6NUK1 477 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 PRSS54Q6PEW0 395 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 LCNL1Q6ZST4 164 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 OR4X2Q8NGF9 303 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 OR1L6Q8NGR2 347 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 OR2T35Q8NGX2 323 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 WFDC12Q8WWY7 111 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 ST6GAL2Q96JF0 529 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 MS4A10Q96PG2 267 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 SLA2Q9H6Q3 261 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 RANGRFQ9HD47 186 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 ZNF355PQ9NSJ1 428 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 MBD2Q9UBB5 411 aa6.58□□□□□ -1.36
SF3B3-212ENST00000568539 STRAPQ9Y3F4 350 aaKnown RBP6.58□□□□□ -1.36
SF3B3-212ENST00000568539 TGP01266 2768 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 FAM223BA6NKX1 122 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 E5RGE8 158 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 CORTO00230 105 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 CYB5BO43169 146 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 CCNKO75909 580 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 OR2J3O76001 311 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 NDUFB8O95169 186 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 TRGV3P03979 118 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 CD28P10747 220 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 CAV2P51636 162 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 TPPP2P59282 170 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 DEFA5Q01523 94 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 TMEM65Q6PI78 240 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 TMEM14EPQ6UXP3 125 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 AKAP14Q86UN6 197 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 NOXA1Q86UR1 476 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 FAM223AQ8IWN6 122 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 NECAP1Q8NC96 275 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 THAP6Q8TBB0 222 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 RNASEH2CQ8TDP1 164 aaKnown RBP6.57□□□□□ -1.36
SF3B3-212ENST00000568539 LYRM2Q9NU23 88 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-212ENST00000568539 THYN1Q9P016 225 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 FBXL7Q9UJT9 491 aa6.57□□□□□ -1.36
SF3B3-212ENST00000568539 IGSF23A1L1A6 192 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 FAM24AA6NFZ4 105 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 PMS2P5A8MQ11 134 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 PRSS46E5RG02 174 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 SMLR1H3BR10 107 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 I3L2K1 104 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 K7EIM0 57 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 MT-CO2P00403 227 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 IFNA4P05014 189 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 OR8U8P0C7N1 319 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 SLC25A4P12235 298 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 P2RY1P47900 373 aa6.56□□□□□ -1.36
SF3B3-212ENST00000568539 RAB11AP62491 216 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms