RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PRO1933Q9H354 126 aa6.25□□□□□ -1.41
ATXN3-250ENST00000568290 SAP30LQ9HAJ7 183 aa6.25□□□□□ -1.41
ATXN3-250ENST00000568290 PARD6AQ9NPB6 346 aa6.25□□□□□ -1.41
ATXN3-250ENST00000568290 KAAG1Q9UBP8 84 aa6.25□□□□□ -1.41
ATXN3-250ENST00000568290 IGHV3OR15-7A0A075B7D8 119 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 A0A1B0GW15 77 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 SMIM27A0A1W2PRY6 76 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 FBLL1A6NHQ2 334 aaKnown RBP6.24□□□□□ -1.41
ATXN3-250ENST00000568290 A8MWL6 223 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 ZNHIT1O43257 154 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 ZNF253O75346 499 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 PROP1O75360 226 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 APCSP02743 223 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 LINC00869P0C866 280 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 RNASE2P10153 161 aaKnown RBP6.24□□□□□ -1.41
ATXN3-250ENST00000568290 MGST1P10620 155 aaKnown RBP6.24□□□□□ -1.41
ATXN3-250ENST00000568290 CRYBB3P26998 211 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 IER3P46695 156 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 GNG10P50151 68 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 ZNF134P52741 427 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 ZNF137PP52743 207 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 ATP1A1-AS1Q5TC04 95 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 VHLLQ6RSH7 139 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 TGIF2LXQ8IUE1 241 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 THAP8Q8NA92 274 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 FMC1Q96HJ9 113 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 TBX15Q96SF7 602 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 TRGV9Q99603 122 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 GFRA4Q9GZZ7 299 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 SEPSECSQ9HD40 501 aaKnown RBP6.24□□□□□ -1.41
ATXN3-250ENST00000568290 NDUFA4L2Q9NRX3 87 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 SERTAD4Q9NUC0 356 aa6.24□□□□□ -1.41
ATXN3-250ENST00000568290 YTHDF2Q9Y5A9 579 aaKnown RBP6.24□□□□□ -1.41
ATXN3-250ENST00000568290 RD3LP0DJH9 198 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 SAA1P0DJI8 122 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-250ENST00000568290 BMP5P22003 454 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 CASP6P55212 293 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 NUTF2P61970 127 aaKnown RBP6.23□□□□□ -1.41
ATXN3-250ENST00000568290 TBR1Q16650 682 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 GCSAMLQ5JQS6 135 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 Q6AWC8 147 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 ZNF474Q6S9Z5 364 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-250ENST00000568290 TEX43Q6ZNM6 134 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 MIR17HGQ75NE6 70 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 LRP11Q86VZ4 500 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 VKORC1L1Q8N0U8 176 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 OR8I2Q8N0Y5 310 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 ZNF114Q8NC26 417 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 DEFB124Q8NES8 71 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 CCL13Q99616 98 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 DCTN5Q9BTE1 182 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-250ENST00000568290 DYNLRB1Q9NP97 96 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 TPSG1Q9NRR2 321 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 UQCR10Q9UDW1 63 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 TBL2Q9Y4P3 447 aaKnown RBP6.23□□□□□ -1.41
ATXN3-250ENST00000568290 R4GN57 208 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 V9GYV3 84 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 CNTRLQ7Z7A1 2325 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 PCSK5Q92824 1860 aa6.23□□□□□ -1.41
ATXN3-250ENST00000568290 SERTM2A0A1B0GWG4 89 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 H0YJW9 148 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 PEX7O00628 323 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 TCAPO15273 167 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 HYPMO75409 117 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 GPX1P07203 203 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 OR5AL1P0C617 328 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 SPINK2P20155 84 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 AMTP48728 403 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 GAGE1Q13065 139 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 PLGLAQ15195 96 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 CLEC12BQ2HXU8 276 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 PSMG4Q5JS54 123 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 COL5A1-AS1Q5SY13 56 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 ZNF705AQ6ZN79 300 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-250ENST00000568290 LYPD1Q8N2G4 141 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 ZCCHC24Q8N2G6 241 aaKnown RBP6.22□□□□□ -1.41
ATXN3-250ENST00000568290 C5orf17Q8NAS9 161 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 TSKUQ8WUA8 353 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 TMEM68Q96MH6 324 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 GPR82Q96P67 336 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 HSPB9Q9BQS6 159 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 DERL1Q9BUN8 251 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 FREM1Q5H8C1 2179 aa6.22□□□□□ -1.41
ATXN3-250ENST00000568290 DNAJC13O75165 2243 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 TRAV30A0A087WSZ9 112 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 TRAV3A0A0B4J244 114 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 B9A039 149 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 HSBP1L1C9JCN9 74 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 DIRC3C9JPN6 131 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM178BH3BS89 294 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 ZNF324O75467 553 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-250ENST00000568290 HSBP1O75506 76 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 SERF1AO75920 110 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 CBLN1P23435 193 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 CEACAM3P40198 252 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 RPL27AP46776 148 aaKnown RBP6.21□□□□□ -1.42
ATXN3-250ENST00000568290 PLP1P60201 277 aa6.21□□□□□ -1.42
ATXN3-250ENST00000568290 KLF5Q13887 457 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms