RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SVEP1Q4LDE5 3571 aa6.06□□□□□ -1.44
SMG1-214ENST00000568038 ANK3Q12955 4377 aaKnown RBP6.05□□□□□ -1.44
SMG1-214ENST00000568038 A0A1W2PN81 502 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 IGLC7A0M8Q6 106 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 GAGE12BA1L429 117 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 GAGE12HA6NDE8 117 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 MED6O75586 246 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 MBPP02686 304 aaPredicted RBP6.05□□□□□ -1.44
SMG1-214ENST00000568038 IGF1P05019 195 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 OR13C7P0DN81 318 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 HKR1P10072 659 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 MDKP21741 143 aaPredicted RBP6.05□□□□□ -1.44
SMG1-214ENST00000568038 CHRNA7P36544 502 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 S100A10P60903 97 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 CYCSP99999 105 aaKnown RBP6.05□□□□□ -1.44
SMG1-214ENST00000568038 RAB32Q13637 225 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 KRTAP24-1Q3LI83 254 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 LRRC37A5PQ49AS3 106 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 AARDQ4LEZ3 155 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 ASPHD1Q5U4P2 390 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 C10orf99Q6UWK7 81 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 C19orf35Q6ZS72 473 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 CENPVQ7Z7K6 275 aaPredicted RBP6.05□□□□□ -1.44
SMG1-214ENST00000568038 ZNF329Q86UD4 541 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 OR4F5Q8NH21 305 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 DTD1Q8TEA8 209 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 ZNF436Q9C0F3 470 aaPredicted RBP6.05□□□□□ -1.44
SMG1-214ENST00000568038 HEYLQ9NQ87 328 aaPredicted RBP6.05□□□□□ -1.44
SMG1-214ENST00000568038 ZNF355PQ9NSJ1 428 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 HSPB7Q9UBY9 170 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 CACFD1Q9UGQ2 172 aa6.05□□□□□ -1.44
SMG1-214ENST00000568038 CLPSL1A2RUU4 121 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 PSMB11A5LHX3 300 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 DIRC3C9JPN6 131 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 FAM90A26D6RGX4 464 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 K7EPK0 472 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 SYNGR2O43760 224 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 SSSCA1O60232 199 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 PRH1P02810 166 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 PF4V1P10720 104 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 PSMB6P28072 239 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 BCAP31P51572 246 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 CRIP2P52943 208 aaPredicted RBP6.04□□□□□ -1.44
SMG1-214ENST00000568038 RAP2BP61225 183 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 ERHP84090 104 aaKnown RBP6.04□□□□□ -1.44
SMG1-214ENST00000568038 WT1-ASQ06250 92 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 IL15RAQ13261 267 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 AKIRIN2Q53H80 203 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 TTC9CQ8N5M4 171 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 OR2C3Q8N628 320 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 KLHDC1Q8N7A1 406 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 PPP1R1CQ8WVI7 109 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 TMEM68Q96MH6 324 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 MS4A10Q96PG2 267 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 SRSF8Q9BRL6 282 aaKnown RBP6.04□□□□□ -1.44
SMG1-214ENST00000568038 GON7Q9BXV9 100 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 NMES1Q9C002 83 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 HIPK2Q9H2X6 1198 aa6.04□□□□□ -1.44
SMG1-214ENST00000568038 PAIP2BQ9ULR5 123 aaKnown RBP6.04□□□□□ -1.44
SMG1-214ENST00000568038 RCL1Q9Y2P8 373 aaKnown RBP6.04□□□□□ -1.44
SMG1-214ENST00000568038 MAST4O15021 2626 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 L7N2F9 121 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 SOX15O60248 233 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 IFNA10P01566 189 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 DEFA4P12838 97 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 CTRB1P17538 263 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 PPIFP30405 207 aaKnown RBP6.03□□□□□ -1.44
SMG1-214ENST00000568038 SNCAP37840 140 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 VAMP2P63027 116 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 SLC35B1P78383 322 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 DEFA5Q01523 94 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 SRSF4Q08170 494 aaKnown RBP6.03□□□□□ -1.44
SMG1-214ENST00000568038 PDLIM3Q53GG5 364 aaPredicted RBP6.03□□□□□ -1.44
SMG1-214ENST00000568038 CTRB2Q6GPI1 263 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 SLC25A24Q6NUK1 477 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 HSD17B13Q7Z5P4 300 aaPredicted RBP6.03□□□□□ -1.44
SMG1-214ENST00000568038 OR5AU1Q8NGC0 362 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 FAM110DQ8TAY7 271 aaPredicted RBP6.03□□□□□ -1.44
SMG1-214ENST00000568038 CIB3Q96Q77 187 aaPredicted RBP6.03□□□□□ -1.44
SMG1-214ENST00000568038 P2RX4Q99571 388 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 C19orf24Q9BVV8 132 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 PSENENQ9NZ42 101 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 ZNF580Q9UK33 172 aa6.03□□□□□ -1.44
SMG1-214ENST00000568038 TEP1Q99973 2627 aaKnown RBP6.03□□□□□ -1.44
SMG1-214ENST00000568038 A0A1B0GUS0 222 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 TMEM89A2RUT3 159 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 NPIPB5A8MRT5 1133 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 H3BP45 60 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 SMLR1H3BR10 107 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 DEDDO75618 318 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 MPC2O95563 127 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 TMEM50AO95807 157 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 IGHG4P01861 327 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 TRGV3P03979 118 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 RLN2P04090 185 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 CRYGCP07315 174 aa6.02□□□□□ -1.45
SMG1-214ENST00000568038 GIPP09681 153 aaPredicted RBP6.02□□□□□ -1.45
SMG1-214ENST00000568038 RNASE2P10153 161 aaKnown RBP6.02□□□□□ -1.45
SMG1-214ENST00000568038 PVALBP20472 110 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms