RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
PALB2-205ENST00000567003 RNF167Q9H6Y7 350 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 PRSS29PA6NIE9 313 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 RTL8CO15255 209 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 MED14OSP0DP75 135 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 PSMB9P28065 219 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 PAFAH1B2P68402 229 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 STHQ8IWL8 128 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 OR5AP2Q8NGF4 316 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 PINX1Q96BK5 328 aaKnown RBP11.21□□□□□ -0.61
PALB2-205ENST00000567003 KRTAP4-5Q9BYR2 181 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 FXYD6Q9H0Q3 95 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 HRH4Q9H3N8 390 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 AUNIPQ9H7T9 357 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 CLEC5AQ9NY25 188 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 EHFQ9NZC4 300 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 RABAC1Q9UI14 185 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 CELA1Q9UNI1 258 aa11.21□□□□□ -0.61
PALB2-205ENST00000567003 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.62
PALB2-205ENST00000567003 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
PALB2-205ENST00000567003 KNCNA6PVL3 124 aa11.2□□□□□ -0.62
PALB2-205ENST00000567003 EIF4EP06730 217 aaKnown RBP11.2□□□□□ -0.62
PALB2-205ENST00000567003 SDC2P34741 201 aa11.2□□□□□ -0.62
PALB2-205ENST00000567003 RPL11P62913 178 aaKnown RBP11.2□□□□□ -0.62
PALB2-205ENST00000567003 TMEM56Q96MV1 263 aa11.2□□□□□ -0.62
PALB2-205ENST00000567003 VSIRQ9H7M9 311 aa11.2□□□□□ -0.62
PALB2-205ENST00000567003 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
PALB2-205ENST00000567003 PRNDQ9UKY0 176 aa11.2□□□□□ -0.62
PALB2-205ENST00000567003 X6R8D5 127 aa11.2□□□□□ -0.62
PALB2-205ENST00000567003 GNG7O60262 68 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 PMP2P02689 132 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 FGF9P31371 208 aaPredicted RBP11.19□□□□□ -0.62
PALB2-205ENST00000567003 RFX2P48378 723 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 SPINK9Q5DT21 86 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 IDNKQ5T6J7 187 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 TRPT1Q86TN4 253 aaKnown RBP11.19□□□□□ -0.62
PALB2-205ENST00000567003 TPRA1Q86W33 373 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 TSPAN14Q8NG11 270 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 MOB3AQ96BX8 217 aa11.19□□□□□ -0.62
PALB2-205ENST00000567003 ZNF2Q9BSG1 426 aaPredicted RBP11.19□□□□□ -0.62
PALB2-205ENST00000567003 TXN2Q99757 166 aa11.18□□□□□ -0.62
PALB2-205ENST00000567003 GINS3Q9BRX5 216 aa11.18□□□□□ -0.62
PALB2-205ENST00000567003 IFT46Q9NQC8 304 aa11.18□□□□□ -0.62
PALB2-205ENST00000567003 BLOC1S6Q9UL45 172 aa11.18□□□□□ -0.62
PALB2-205ENST00000567003 PUS1Q9Y606 427 aaKnown RBP eCLIP11.18□□□□□ -0.62
PALB2-205ENST00000567003 A0A1B0GU03 582 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 ZNF705EA8MWA4 302 aaPredicted RBP11.17□□□□□ -0.62
PALB2-205ENST00000567003 ZNF688P0C7X2 276 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 MIFP14174 115 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 PHLDA2Q53GA4 152 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 UBE2UQ5VVX9 321 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 IZUMO2Q6UXV1 221 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 FKBP11Q9NYL4 201 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 SSR3Q9UNL2 185 aa11.17□□□□□ -0.62
PALB2-205ENST00000567003 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 IGKV1-39P01597 117 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 IGKV1D-39P04432 117 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 CBX5P45973 191 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 IZUMO4Q1ZYL8 232 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 C12orf74Q32Q52 190 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 POM121L12Q8N7R1 296 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 DUSP18Q8NEJ0 188 aa11.16□□□□□ -0.62
PALB2-205ENST00000567003 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 K7EQG2 157 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 GPR31O00270 319 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 AMBPP02760 352 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 PPP5CP53041 499 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 PRCDQ00LT1 54 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 DHRS11Q6UWP2 260 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 ZNF575Q86XF7 245 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 SPARTQ8N0X7 666 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 CADM3Q8N126 398 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 OR4A16Q8NH70 328 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 BORCS5Q969J3 196 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 SEC22AQ96IW7 307 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 TSC22D3Q99576 134 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 DIABLOQ9NR28 239 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 TBC1D24Q9ULP9 559 aa11.15□□□□□ -0.62
PALB2-205ENST00000567003 APOBP04114 4563 aaKnown RBP11.14□□□□□ -0.63
PALB2-205ENST00000567003 A0A0A6YYH2 397 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 LOC100506127A0A0U1RQW1 187 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 A6NJ64 397 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 CD5P06127 495 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 SPP1P10451 314 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 CMTM1Q8IZ96 169 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 CENPSQ8N2Z9 138 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 CSNK1G2-AS1Q8NCQ2 148 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 OR5H2Q8NGV7 314 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 MRGPRFQ96AM1 343 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 MRPL36Q9P0J6 103 aaKnown RBP11.14□□□□□ -0.63
PALB2-205ENST00000567003 ANAPC10Q9UM13 185 aa11.14□□□□□ -0.63
PALB2-205ENST00000567003 IGLV2-18A0A075B6J9 118 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms