RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 GPR61Q9BZJ8 451 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 ARL6Q9H0F7 186 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 MAGT1Q9H0U3 335 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 RBKSQ9H477 322 aa10.49□□□□□ -0.73
CLK3-218ENST00000566926 A0A1W2PN81 502 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 G3V318 75 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 G3V4G9 280 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 CNIH1O95406 144 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 CA2P00918 260 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 CRYGBP07316 175 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 CXCL2P19875 107 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 CHRNA7P36544 502 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
CLK3-218ENST00000566926 PRSS8Q16651 343 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 ECSCRQ19T08 205 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 C8orf86Q6ZUL3 223 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 TMUB2Q71RG4 321 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 C1QL4Q86Z23 238 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 UBE2E2Q96LR5 201 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 ARPC5LQ9BPX5 153 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 PLEKHA3Q9HB20 300 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 U3KQ87 197 aa10.48□□□□□ -0.73
CLK3-218ENST00000566926 FCN1O00602 326 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 BCL2L11O43521 198 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 IGLV1-40P01703 118 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 HOXA1P49639 335 aaPredicted RBP10.47□□□□□ -0.73
CLK3-218ENST00000566926 AP2S1P53680 142 aaPredicted RBP10.47□□□□□ -0.73
CLK3-218ENST00000566926 HBG1P69891 147 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 HBG2P69892 147 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 NDPQ00604 133 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 FXYD3Q14802 87 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 BEAN1Q3B7T3 259 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 KPRPQ5T749 579 aaPredicted RBP10.47□□□□□ -0.73
CLK3-218ENST00000566926 UNQ5815/PRO19632Q6UWF5 114 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 TMEM252Q8N6L7 170 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 C4orf3Q8WVX3 66 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 ARPC1AQ92747 370 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 TMEM68Q96MH6 324 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 MCRIP2Q9BUT9 160 aaKnown RBP10.47□□□□□ -0.73
CLK3-218ENST00000566926 ZNF430Q9H8G1 570 aaPredicted RBP10.47□□□□□ -0.73
CLK3-218ENST00000566926 PSENENQ9NZ42 101 aa10.47□□□□□ -0.73
CLK3-218ENST00000566926 STRAPQ9Y3F4 350 aaKnown RBP10.47□□□□□ -0.73
CLK3-218ENST00000566926 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 CCL24O00175 119 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 SULT1A1P50225 295 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 RAB9AP51151 201 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 EWSR1Q01844 656 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLK3-218ENST00000566926 OPCMLQ14982 345 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 OXLD1Q5BKU9 147 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 ETV3LQ6ZN32 361 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 REC114Q7Z4M0 266 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 SLC51BQ86UW2 128 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 LINC00482Q8N8I6 264 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 MYOZ3Q8TDC0 251 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 P2RX4Q99571 388 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 SLA2Q9H6Q3 261 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 HEYLQ9NQ87 328 aaPredicted RBP10.46□□□□□ -0.73
CLK3-218ENST00000566926 NDUFA4L2Q9NRX3 87 aa10.46□□□□□ -0.73
CLK3-218ENST00000566926 MEGF8Q7Z7M0 2845 aa10.46□□□□□ -0.74
CLK3-218ENST00000566926 TEX50A0A1B0GTY4 177 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 DFFBO76075 338 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 NXPH3O95157 252 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 EGR2P11161 476 aaPredicted RBP10.45□□□□□ -0.74
CLK3-218ENST00000566926 IGLL1P15814 213 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 HTR2BP41595 481 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 PAX9P55771 341 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 RAB11AP62491 216 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 GNB1P62873 340 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 ERHP84090 104 aaKnown RBP10.45□□□□□ -0.74
CLK3-218ENST00000566926 ZNF266Q14584 549 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 C19orf54Q5BKX5 351 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 LCNL1Q6ZST4 164 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 ZNF491Q8N8L2 437 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 LFNGQ8NES3 379 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 DPF1Q92782 380 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 PINX1Q96BK5 328 aaKnown RBP10.45□□□□□ -0.74
CLK3-218ENST00000566926 TPSG1Q9NRR2 321 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 FBXO7Q9Y3I1 522 aa10.45□□□□□ -0.74
CLK3-218ENST00000566926 MSGN1A6NI15 193 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 H3BUA1 57 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 JTBO76095 146 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 TMEM50AO95807 157 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 IAPPP10997 89 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 RPL27AP46776 148 aaKnown RBP10.44□□□□□ -0.74
CLK3-218ENST00000566926 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLK3-218ENST00000566926 RUNX1Q01196 453 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 SPANXN5Q5MJ07 72 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 SLC24A4Q8NFF2 622 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 STOML3Q8TAV4 291 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 RAX2Q96IS3 184 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 FAM103A1Q9BTL3 118 aaKnown RBP10.44□□□□□ -0.74
CLK3-218ENST00000566926 KLK15Q9H2R5 256 aa10.44□□□□□ -0.74
CLK3-218ENST00000566926 ZMAT5Q9UDW3 170 aaKnown RBP10.44□□□□□ -0.74
CLK3-218ENST00000566926 BORCS7-ASMTA0A0B4J1R7 106 aa10.43□□□□□ -0.74
CLK3-218ENST00000566926 IGSF23A1L1A6 192 aa10.43□□□□□ -0.74
CLK3-218ENST00000566926 FAM24AA6NFZ4 105 aa10.43□□□□□ -0.74
CLK3-218ENST00000566926 WIPF1O43516 503 aa10.43□□□□□ -0.74
CLK3-218ENST00000566926 IFNA10P01566 189 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms