RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 C2orf83Q53S99 150 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 PRR31Q5SQ13 230 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 ASPHD1Q5U4P2 390 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 CTRB2Q6GPI1 263 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 OR8G2PQ6IF36 304 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 UNQ5815/PRO19632Q6UWF5 114 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 ETV3LQ6ZN32 361 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 C19orf35Q6ZS72 473 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 HAPLN4Q86UW8 402 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 ZNF114Q8NC26 417 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 TMEM170AQ8WVE7 144 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 BSCL2Q96G97 398 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-205ENST00000564899 SMIM3Q9BZL3 60 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 PRSS22Q9GZN4 317 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 FBXL17Q9UF56 701 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 IGF1P05019 195 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 CRYGCP07315 174 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 CRIP2P52943 208 aaPredicted RBP8.71□□□□□ -1.02
SF3B3-205ENST00000564899 HILS1P60008 231 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 SLC38A11Q08AI6 406 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 ARL16Q0P5N6 197 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 CLINT1Q14677 625 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 OPCMLQ14982 345 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 AWAT1Q58HT5 328 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.02
SF3B3-205ENST00000564899 Q6ZS46 218 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 STPG2Q8N412 459 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 LILRB2Q8N423 598 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 TTC9CQ8N5M4 171 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 OR10P1Q8NGE3 313 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 OR1S2Q8NGQ3 325 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 OR5C1Q8NGR4 320 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 OR1P1Q8NH06 330 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 FAM110DQ8TAY7 271 aaPredicted RBP8.71□□□□□ -1.02
SF3B3-205ENST00000564899 TAF15Q92804 592 aaKnown RBP eCLIP8.71□□□□□ -1.02
SF3B3-205ENST00000564899 TMEM68Q96MH6 324 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 JMJD8Q96S16 334 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 ARPC5LQ9BPX5 153 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 WNT10AQ9GZT5 417 aa8.71□□□□□ -1.02
SF3B3-205ENST00000564899 F11RQ9Y624 299 aaKnown RBP8.71□□□□□ -1.02
SF3B3-205ENST00000564899 TET2Q6N021 2002 aaPredicted RBP8.71□□□□□ -1.02
SF3B3-205ENST00000564899 TRAV41A0A0B4J266 112 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 PMS2P5A8MQ11 134 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 G3V318 75 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 AP4M1O00189 453 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 PLXNB1O43157 2135 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 FBXO24O75426 580 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 RNASE1P07998 156 aaKnown RBP8.7□□□□□ -1.02
SF3B3-205ENST00000564899 DEFA4P12838 97 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 UBA52P62987 128 aaKnown RBP8.7□□□□□ -1.02
SF3B3-205ENST00000564899 AKIRIN2Q53H80 203 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 OR5T1Q8NG75 326 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 OR1L6Q8NGR2 347 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 RNASEH2CQ8TDP1 164 aaKnown RBP8.7□□□□□ -1.02
SF3B3-205ENST00000564899 PINX1Q96BK5 328 aaKnown RBP8.7□□□□□ -1.02
SF3B3-205ENST00000564899 ZNF702PQ9H963 129 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 LINC00527Q9UJ94 153 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 WNK1Q9H4A3 2382 aa8.7□□□□□ -1.02
SF3B3-205ENST00000564899 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 PRSS46E5RG02 174 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 CORTO00230 105 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 TAAR5O14804 337 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 CYB5BO43169 146 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 PRH1P02810 166 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 MFAP2P55001 183 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 ATP6V1FQ16864 119 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 TMEM95Q3KNT9 176 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 PVRIGQ6DKI7 326 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 SLC25A24Q6NUK1 477 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 MISP3Q96FF7 219 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 NOL4LQ96MY1 436 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-205ENST00000564899 ATP5SQ99766 215 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 ZNF471Q9BX82 626 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-205ENST00000564899 WFDC1Q9HC57 220 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 ZNF580Q9UK33 172 aa8.69□□□□□ -1.02
SF3B3-205ENST00000564899 SMCO3A2RU48 225 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 TSPAN9O75954 239 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 DFFBO76075 338 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 CRYBA1P05813 215 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 OPRK1P41145 380 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 RPL15P61313 204 aaKnown RBP8.68□□□□□ -1.02
SF3B3-205ENST00000564899 DLK1P80370 383 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 CD69Q07108 199 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 C19orf54Q5BKX5 351 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 SLC16A13Q7RTY0 426 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 Q8N2B8 174 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 TMEM147Q9BVK8 224 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 GGACTQ9BVM4 153 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 CYTL1Q9NRR1 136 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 UQCC1Q9NVA1 299 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 DMRT1Q9Y5R6 373 aa8.68□□□□□ -1.02
SF3B3-205ENST00000564899 IGLV11-55A0A075B6I3 123 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 BORCS7-ASMTA0A0B4J1R7 106 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 UBE2L5PA0A1B0GUS4 154 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 RPS10-NUDT3A0A1W2PQS6 291 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 MT-CO2P00403 227 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 IFNA5P01569 189 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 HIST1H1BP16401 226 aaKnown RBP8.67□□□□□ -1.02
SF3B3-205ENST00000564899 EXOSC2Q13868 293 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms